| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1054 |
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| Symbol | |
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| ID | 5193989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1185914 |
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| End bp | 1186822 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585512 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001266399 |
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| Protein GI | 148546297 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00469845 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA CCACCGCCCA ACTGCGGGCC TCACCCCTGG ACGCGCTTCA GCGCTGGCTG
CCCAAGCTGG TGCTGGCACC CAGCATGTTC ATCGTCCTGG TGGGCTTCTA CGGCTACATC
CTCTGGACCT TCGTGCTGTC CTTCACCACC TCGACCTTTC TGCCTACCTA CAAGTGGGCG
GGCCTTGCGC AATACGCCCG TCTGTTCGAC AACGACCGCT GGTGGGTGGC GAGCAAGAAC
CTGCTTCTGT TCGGCGGCCT GTTCATCGCC ATCAGCCTGG CCATCGGTGT GTTGCTGGCG
GTGTTGCTCG ACCAGCGCAT CCGTCGCGAG GGCTTCATCC GCACTATCTA CCTGTACCCC
ATGGCACTGT CGATGATCGT CACCGGCACG GCCTGGAAGT GGCTGCTCAA CCCCGGCATG
GGCCTGGACA AGTTGTTGCG TGACTGGGGC TGGGAGGGTT TTCGCCTGGA CTGGCTGATC
GATCCCGACC GGGTGGTGTA TTGCCTGGTG ATCGCGGCCG TGTGGCAGGC TTCGGGCTTC
ATCATGGCCA TGTTCCTTGC CGGCTTGCGT GGCGTTGACC CGTCGATCAT CCGCGCTGCG
CAGATGGATG GCGCCAGCCT GCCGCGCATC TACTGGACCG TGGTGCTGCC CAGCCTGCGC
CCGGTGTTCT TCAGCGCGCT GATGATCCTC TCGCACATTG CCATCAAGAG CTTCGACCTG
GTGGCGGCAA TGACGGCCGG CGGCCCGGGT TACTCCTCCG ACCTGCCGGC AATGTTCATG
TACTCGTTCA CCTTCAGCCG CGGCCAGATG GGCATGGGCT CGGCCAGCGC CATCCTGATG
CTCGGGGCAA TCCTGGCGAT CCTCGTGCCT TACCTGTACT CGGAGCTGCG GAGCAAACGC
CATGCATAG
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| Protein sequence | MTTTTAQLRA SPLDALQRWL PKLVLAPSMF IVLVGFYGYI LWTFVLSFTT STFLPTYKWA
GLAQYARLFD NDRWWVASKN LLLFGGLFIA ISLAIGVLLA VLLDQRIRRE GFIRTIYLYP
MALSMIVTGT AWKWLLNPGM GLDKLLRDWG WEGFRLDWLI DPDRVVYCLV IAAVWQASGF
IMAMFLAGLR GVDPSIIRAA QMDGASLPRI YWTVVLPSLR PVFFSALMIL SHIAIKSFDL
VAAMTAGGPG YSSDLPAMFM YSFTFSRGQM GMGSASAILM LGAILAILVP YLYSELRSKR
HA
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