Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0485 |
Symbol | |
ID | 5191650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 564416 |
End bp | 565609 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640584938 |
Product | elongation factor Tu |
Protein accession | YP_001265839 |
Protein GI | 148545737 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000994987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0792856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAAAG AAAAATTTGA TCGTTCCCTT CCCCACGTTA ACGTCGGCAC TATCGGCCAC GTTGACCACG GTAAGACCAC TCTGACCGCA GCTCTGACTC GCGTTTGCTC CGAAGTTTTC GGTTCGGCAA TCGTTGAGTT CGACAAGATC GACTCGGCTC CGGAAGAAAA AGCGCGCGGT ATCACCATCA ACACCGCTCA CGTTGAGTAC AACTCGACCA TTCGTCACTA CGCTCACGTT GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAC GGCGCGATCC TGGTTTGCTC GGCCGCCGAT GGTCCGATGC CACAAACCCG TGAGCACATC CTGCTGTCCC GTCAGGTAGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCTGACCTG GTAGACGACG CTGAGCTGCT GGAACTGGTC GAGATGGAAG TTCGCGACCT GCTGTCCACC TATGACTTCC CAGGCGACGA CACCCCGATC ATCATCGGTT CGGCTCGTAT GGCGCTGGAA GGCAAAGACG ACAACGAAAT GGGCACTACC GCTGTTAAGA AGCTGGTAGA AACTCTGGAC AGCTACATTC CTGAGCCAGT TCGTGCTATC GACCAGCCGT TCCTGATGCC GATCGAAGAC GTGTTCTCGA TTTCGGGTCG TGGTACCGTT GTTACCGGTC GTATCGAGCG TGGTATCGTC CGCGTTCAGG ATCCGCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT CTGCTGCGTG GCACCAAGCG TGACGACGTT GAGCGTGGTC AGGTTCTGGT CAAGCCAGGT TCGGTCAAGC CGCACACCAA GTTCACCGCA GAAGTCTACG TCCTGTCGAA GGAAGAAGGC GGCCGTCACA CGCCGTTCTT CAAAGGCTAC CGTCCACAGT TCTACTTCCG TACCACTGAC GTGACCGGTA ACTGCGAACT GCCGGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT CAGATGACTG TTACCCTGAT CAAGACCATC GCAATGGAAG ACGGCCTGCG CTTCGCTATC CGTGAAGGCG GTCGTACCGT CGGCGCCGGC GTTGTGGCCA AAATCATCGA GTAA
|
Protein sequence | MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAIVEFDKI DSAPEEKARG ITINTAHVEY NSTIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE GKDDNEMGTT AVKKLVETLD SYIPEPVRAI DQPFLMPIED VFSISGRGTV VTGRIERGIV RVQDPLEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE
|
| |