| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4816 |
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| Symbol | |
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| ID | 5196431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5303474 |
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| End bp | 5304235 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584373 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001265291 |
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| Protein GI | 148557709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.769943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCTTC AAAGAAAATC CTCGTTCGCC GGGGTCCGTC TGCGGCGCAA GGCGCCCGTG
GCGCTCATGG CCATGCTGAT GCTGGCGAGC TGCGCCAGCG CCCCCAAGAT CGGTGGCGCG
ACGAATATAC AGGTGCTCGA CGCCACCGAA TTGCCGGCGC CCGATCGATC GGACATGGTC
GAGACCGAGC GTCCCTATAT CGTCGGCCCG TTCGACAAGC TGGCGATCGA CGTGTTCGGG
ATCGACGAGC TCTCCAACCG CAAGGCCCAG GTCGACGCGA GCGGCCGGAT ATCCTTCCCG
CTGGTCGGCG TGGTCAACGT GGCCGGCCTG ACGCCGGGTG AGATCGAGGT CGTGCTGCAG
CAGAAGCTGG CGACCAACTA TGTCCGCAAC CCGCAGGTGA CGGTCAATCT CGACCAGACC
GTCAGCCAGG TGGTCACGGT CGAAGGGCAG GTCAAGAAGC CGGGACTCTT CCCGGTGGTC
GGCCGGATGA CGCTGCTGCG CGCGGTCGCG CTCGCGGGCG GGACCGACGA GTTCGCCAAG
CTGAACCAGG TCGTCGTCTT CCGCACGGTG AAGGGCGAGC AATATGCCGC GCTCTACAGT
CTCAAGCAGA TCCGGGTCGG CGCCTATGCC GATCCCGACA TCTACGCCAA CGACGTGGTC
GTGGTGGGCG AATCGCGGGC GCGCCGGACC TTCAAGGATC TCCTCCAGGT GGTTCCGCTG
CTCACGACGC CGATCATCGT CGCCGTGGAC CGGTTCAGAT AG
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| Protein sequence | MFLQRKSSFA GVRLRRKAPV ALMAMLMLAS CASAPKIGGA TNIQVLDATE LPAPDRSDMV
ETERPYIVGP FDKLAIDVFG IDELSNRKAQ VDASGRISFP LVGVVNVAGL TPGEIEVVLQ
QKLATNYVRN PQVTVNLDQT VSQVVTVEGQ VKKPGLFPVV GRMTLLRAVA LAGGTDEFAK
LNQVVVFRTV KGEQYAALYS LKQIRVGAYA DPDIYANDVV VVGESRARRT FKDLLQVVPL
LTTPIIVAVD RFR
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