| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4707 |
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| Symbol | |
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| ID | 5199091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5177521 |
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| End bp | 5178960 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584261 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001265182 |
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| Protein GI | 148557600 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.9984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA AGCCCCGCAC CCTCTACGAG AAGATCTGGG ACGCGCATGT CGTCGAGCGT
CGCGACGACG GCACCTGCCT GATCTACATC GACCGCCACC TCGTCCATGA GGTCACCAGC
CCGCAGGCCT TCGAGGCGCT GCGCGTCGCC GGCCGCAAGC TGCGGCGGCC CGATCTCACC
CTCGCGGTGC CGGACCATAA TCTTCCCACC ACCGCGCGGC TCGACGCGGA GGGCAGGCGC
GTGCCCATCG CCGATGTGGA ATCGGCGAGC CAGCTCGCCA CGCTCGAGCG CAACGCGCCC
GAGTTTGGCG TCCGCTACAT CGATGCGGTC GCGCCCGAGC AGGGCATCGT CCATGTCGTC
GGGCCCGAGC AGGGCTTCTC GCAGCCGGGC ACGACGATCG TCTGCGGCGA CAGCCATACC
GCCGCGCATG GCGGCCTCGG CGCGCTCGCC TTCGGCATCG GCACGTCGGA GATCGAGCAT
GTCATGGCGA CGCAGACGCT GCTGCTCGCC CCGTCGAAGA CGATGGAGGT GCGGGTCGAA
GGCGCGCTCG GCGCCGGCGT CAGCCCGAAG GACGTGATCC TCCACGTCAT CGGCGTGATC
GGCGCGGCCG GCGGCACCGG CTACGTCATC GAATATACCG GCAACGTCTT CCGCGAGATG
TCGATCGAGG GGCGGCTGAC CGTCTGCAAC ATGTCGATCG AGGGCGGCGC CCGCGCCGGC
CTGATCGCGC CCGATGAGAC GACCTTCGCC TATATGCGCG GCCGGCCCAT GGCGCCTGCG
GGCGCCGACT GGGACAAGGC GGTCGCCTGG TGGCGGACGC TGCCGACCGA TCCGGGCGCG
ACCTATGACA AGGTCGTGGT CATCGACGCG GCCGACATCG CGCCCTGCCT GACCTGGGGC
ACCAGCCCCG AGGACGTCGT GCCGATCACC GGCGTCGTCC CCGATCCGAT GAGCTTCGCC
GATCCGTCGA AGCAGGTCGC CGCGCAGAAG TCGCTCGACT ATATGGGCCT GACGCCGGGC
ACCCGCATGC GGGACGTTCC GGTCGAGAAC ATCTTCATCG GCAGCTGCAC CAACAGCCGG
ATCGAGGACC TGCGCGCCGC CGCCGCCGTG GTGAAGGGGC GCAAGGTCGC CGCCAATGTC
CGCCAGGCGC TGATCGTGCC GGGCTCGGGC CTGGTCAAGC GGCAAGCGGA AGAGGAAGGG
CTCGACCGCA TCTTCGTCGA GGCGGGTTTC GAATGGCGCG AGCCGGGCTG CTCGATGTGC
CTGGCGATGA ACCCGGACAA GGTGCCGGCG GGCGAGCGCT GCGCCTCCAC CTCGAACCGC
AACTTCGTCG GCCGGCAGGG GCCGGGCGCG CGGACCCACC TCGTCTCGCC CGCCATGGCG
GCGGCGGCGG CGGTGACCGG GCACCTGACC GACGTCCGCG AGCTGGAGCC GGCGGCATGA
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| Protein sequence | MSSKPRTLYE KIWDAHVVER RDDGTCLIYI DRHLVHEVTS PQAFEALRVA GRKLRRPDLT
LAVPDHNLPT TARLDAEGRR VPIADVESAS QLATLERNAP EFGVRYIDAV APEQGIVHVV
GPEQGFSQPG TTIVCGDSHT AAHGGLGALA FGIGTSEIEH VMATQTLLLA PSKTMEVRVE
GALGAGVSPK DVILHVIGVI GAAGGTGYVI EYTGNVFREM SIEGRLTVCN MSIEGGARAG
LIAPDETTFA YMRGRPMAPA GADWDKAVAW WRTLPTDPGA TYDKVVVIDA ADIAPCLTWG
TSPEDVVPIT GVVPDPMSFA DPSKQVAAQK SLDYMGLTPG TRMRDVPVEN IFIGSCTNSR
IEDLRAAAAV VKGRKVAANV RQALIVPGSG LVKRQAEEEG LDRIFVEAGF EWREPGCSMC
LAMNPDKVPA GERCASTSNR NFVGRQGPGA RTHLVSPAMA AAAAVTGHLT DVRELEPAA
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