Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3590 |
Symbol | |
ID | 5197399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3952031 |
End bp | 3952732 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640583145 |
Product | hypothetical protein |
Protein accession | YP_001264074 |
Protein GI | 148556492 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.080762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.394996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGACG ACATCGACAT GCTCGCCGGC GAATATGTGC TCGGCACGCT CGACGACACC GAACGCCGCG CCTTCCAGCG CCGGCTGCTG ACCGACCCGG CCGCGGTCGC GGCGGTGGCG ACATGGCAGG AGCGCCTGTC CCCGCTGCTC CTCGCCGTAC CGGAAGAAGC GCCCCCGGCA GGACTGTGGA CGCGGATCGG CGCGGACAGC GGCCCGGCCA ACGACAATGG CCGCCTGCGC CGCTGGCAGG TCGCGACGGT CGCCGCCGCG CTCGTCGCGC TGGTCAGCAC CGGCGTCGCG CTTCGCCCCC GCATCGAACC GGCCGCGCCC GCGCCACAGG TCGCGCAGCA GGCTCCCTCG CCGCTGTTCC AGTCGGTCGC CGCGCTCAGC GAACAGGGCG GCGCGCCGGC GCTGCTCGTC ACCTATGACC GCGACCGCAA GGAGATGCGG GTGATGCCGG TGAACGTCGC GCCGCGTCCC GGCCACAGCC TGGAACTCTG GGTGATCGCC GGCAAGGCGG CGCCCAGGTC GATCGGCCTG ATGCGCGAGG ACGGCGCGAC CGCGCTCGAC CGCATGGCGC TCGACCTGCA GCAGGAGATG ACGATCGCGG TGTCGGTCGA GCCCAAGGGC GGGTCGCCGA CCGGCCTGCC GACCGGGCCG GTGGTCTATT CGGGCCGGAT GGTCTCGCTG CCGACGAGCT GA
|
Protein sequence | MADDIDMLAG EYVLGTLDDT ERRAFQRRLL TDPAAVAAVA TWQERLSPLL LAVPEEAPPA GLWTRIGADS GPANDNGRLR RWQVATVAAA LVALVSTGVA LRPRIEPAAP APQVAQQAPS PLFQSVAALS EQGGAPALLV TYDRDRKEMR VMPVNVAPRP GHSLELWVIA GKAAPRSIGL MREDGATALD RMALDLQQEM TIAVSVEPKG GSPTGLPTGP VVYSGRMVSL PTS
|
| |