Gene Swit_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3590 
Symbol 
ID5197399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3952031 
End bp3952732 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID640583145 
Producthypothetical protein 
Protein accessionYP_001264074 
Protein GI148556492 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.080762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.394996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG ACATCGACAT GCTCGCCGGC GAATATGTGC TCGGCACGCT CGACGACACC 
GAACGCCGCG CCTTCCAGCG CCGGCTGCTG ACCGACCCGG CCGCGGTCGC GGCGGTGGCG
ACATGGCAGG AGCGCCTGTC CCCGCTGCTC CTCGCCGTAC CGGAAGAAGC GCCCCCGGCA
GGACTGTGGA CGCGGATCGG CGCGGACAGC GGCCCGGCCA ACGACAATGG CCGCCTGCGC
CGCTGGCAGG TCGCGACGGT CGCCGCCGCG CTCGTCGCGC TGGTCAGCAC CGGCGTCGCG
CTTCGCCCCC GCATCGAACC GGCCGCGCCC GCGCCACAGG TCGCGCAGCA GGCTCCCTCG
CCGCTGTTCC AGTCGGTCGC CGCGCTCAGC GAACAGGGCG GCGCGCCGGC GCTGCTCGTC
ACCTATGACC GCGACCGCAA GGAGATGCGG GTGATGCCGG TGAACGTCGC GCCGCGTCCC
GGCCACAGCC TGGAACTCTG GGTGATCGCC GGCAAGGCGG CGCCCAGGTC GATCGGCCTG
ATGCGCGAGG ACGGCGCGAC CGCGCTCGAC CGCATGGCGC TCGACCTGCA GCAGGAGATG
ACGATCGCGG TGTCGGTCGA GCCCAAGGGC GGGTCGCCGA CCGGCCTGCC GACCGGGCCG
GTGGTCTATT CGGGCCGGAT GGTCTCGCTG CCGACGAGCT GA
 
Protein sequence
MADDIDMLAG EYVLGTLDDT ERRAFQRRLL TDPAAVAAVA TWQERLSPLL LAVPEEAPPA 
GLWTRIGADS GPANDNGRLR RWQVATVAAA LVALVSTGVA LRPRIEPAAP APQVAQQAPS
PLFQSVAALS EQGGAPALLV TYDRDRKEMR VMPVNVAPRP GHSLELWVIA GKAAPRSIGL
MREDGATALD RMALDLQQEM TIAVSVEPKG GSPTGLPTGP VVYSGRMVSL PTS