| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3189 |
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| Symbol | |
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| ID | 5198880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3498554 |
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| End bp | 3500425 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582735 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001263674 |
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| Protein GI | 148556092 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACTT TCACCACATC GCTGATCGCG GCCCTGGCGA TATTGCCGGG CACGGCCCAC
GCCGAGGAGG CCGACGCCGA CAGCATCGTC GTCACCGCCA CCCGCACCGA GACGAAGCTG
TCCGAGGTCG GCAAGTCGAT CTCGGTGATC GACGCCGCCA CGATCGAGCA GCGCCAGACC
GTGCCGCTCG CCGATCTGCT GCGGACGCTG CCGGGCGTGA CGATCCAGCG CAACGGCGGC
CTCGGCACCA TCACCAGCGT GTTCATCCGC GGCGCCCAGT CGGACCAGAC GGTGGCGCTG
ATCGACGGGA TCAAGCTCAA TGACCCGTCG GCGCCGGGCG GCGGCTTCAA CTTCGCCGAC
CTGCTGACCG ACAATCTCGA GCGGATCGAG GTGCTGCGCG GGCCGCAGTC GGTGCTGTGG
GGCAGCCAGG CGATCGGCGG CGTGATCAAC CTGATCACCC GCGAGCCGAC CGACCGGTTC
GAGGTGCGGG CGACCGGCGA ATATGGCCGC TACGAGACCG GCCGCCTGTC GGGCGCGGTC
AGCGGCAAGG TCGGCCCGAC CGCGATCAGC GCCGGCGCGG GCTACCTGAC CACCGACGGC
ATCTCGGTCG CCGACAGCGG CACGGAGAAG GACGGCTATC ACCTGTTCGG CGCGCATCTC
AAGACGACGA CCGAGCTGAC CGAGCAGCTC TCGCTCGACC TGCGCGGCTT CTATACGAAG
AGCAAGGTCG ACCTCGACGG CTTCCCGGCG CCGAACTACA CCCTCGCCGA CACCGACGAA
TATCAGCGCC AGCAGCAGAT CGTCGGCTAT GCCGGGCTCA ACGCCAACCT GTTCGACGGC
CGCTTCCGCA ACCGCTTCGC CGCCGCCTTC ACCCGGATCG ACCGCGACAG CTACGACCCG
GCGGCGGCTC CGGTGAAGAA TTTCGACGCG CGCGGGCGCA ACCTGCGCTT CGAATATCAG
GGCATCGCCG AGTTGGGGCT CGTCCGGGCC ACCTTCGGCG CCGAGCATCA GGAGGAGAAG
CTCCGCACGA TCAGCGCCTA TTTCGGCCCG CCGGTGACGG CGCGCGCCAA GGCGAACATC
GACAGCGCCT ATCTCGACCT CCACGCCCGG CCGATCGAGG GCCTCAACCT CGGCGCCGGG
GTCCGCTACG ACGACCACAG CCAGTTCGGC GACGCGACGA CGGCCAGCGC CGACCTCGCT
TATTCGCCGA ACGGGGGATC GACCACCCTC CGCGCCAGCT ATGGCGAGGG CTTCAAGGCG
CCGTCGCTCT ACCAGCTCTA CGGCGACTAC GGCTTCCGCG ACCTGCGGCC CGAAAAGGCC
AAGGGCTGGG ACGCCGGCAT CGCCCAGAAG CTGATCAGCG AGGCGGTCGA GCTGCGCGCG
ACCTGGTTCC AGCGCAACAC GACCAACCTG ATCGACTTCG ACCTGGGCAC CTTCACCTAC
GCCAATATCG CGCGGGCGCG GGCGCGCGGC GTCGAGGCCG AGCTGCGCAT CGCGCCGACC
AGCGAGCTGC TGTTCACCGC GAACTACAGC TTCACCAACG CCCGCAACCG CGAGCGGACC
GATCCCAATT TCGGCCGCCA GCTCGCCCGG CGGCCGCGCC AGACGGTGAA CGTGACCGGC
GACTATCGCT GGCCGTTCGG CCTGACCACG GGCGCCACGA TCACCCATGT CTCGCGCAGC
TTCGACGATG CCGCCAACCG CAACCGGCTC GGCGACTATG TGCTCGTCGA CCTGCGCGCG
GCGCTGCCGC TGACCGAGGC GATCGAGCTC TACGGCCGGA TCGAGAATCT GTTCGACGAG
CGCTACCAGA CCGCCGCCGG CTATGGCCAG CTCGGCCGGG CGGCGACAGC CGGTGTCCGC
TTCCGCTACT AG
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| Protein sequence | MRTFTTSLIA ALAILPGTAH AEEADADSIV VTATRTETKL SEVGKSISVI DAATIEQRQT
VPLADLLRTL PGVTIQRNGG LGTITSVFIR GAQSDQTVAL IDGIKLNDPS APGGGFNFAD
LLTDNLERIE VLRGPQSVLW GSQAIGGVIN LITREPTDRF EVRATGEYGR YETGRLSGAV
SGKVGPTAIS AGAGYLTTDG ISVADSGTEK DGYHLFGAHL KTTTELTEQL SLDLRGFYTK
SKVDLDGFPA PNYTLADTDE YQRQQQIVGY AGLNANLFDG RFRNRFAAAF TRIDRDSYDP
AAAPVKNFDA RGRNLRFEYQ GIAELGLVRA TFGAEHQEEK LRTISAYFGP PVTARAKANI
DSAYLDLHAR PIEGLNLGAG VRYDDHSQFG DATTASADLA YSPNGGSTTL RASYGEGFKA
PSLYQLYGDY GFRDLRPEKA KGWDAGIAQK LISEAVELRA TWFQRNTTNL IDFDLGTFTY
ANIARARARG VEAELRIAPT SELLFTANYS FTNARNRERT DPNFGRQLAR RPRQTVNVTG
DYRWPFGLTT GATITHVSRS FDDAANRNRL GDYVLVDLRA ALPLTEAIEL YGRIENLFDE
RYQTAAGYGQ LGRAATAGVR FRY
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