Gene Swit_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3011 
Symbol 
ID5200257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3297773 
End bp3298306 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID640582560 
Producthypothetical protein 
Protein accessionYP_001263500 
Protein GI148555918 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCC GCGCGGCGGC GGCCGCCCTG CTGCTGTGGA TCGCGGGCTT CATGGCCTTC 
GCGCTGTTCC TGCCGCAGCC CGCGCCCGAC GGGATCGCCA CCGACGGCAT CGTCGTGATG
ACGGGCGGAC GCGGCCGGGT CGAGCGCGGC CTCCGCCTGC TCGAGGCGAA GCGGGCGAAG
CGGCTGCTGA TCTCCGGCGC CGACCGGCGG GTCCGCCCGC ACGAGCTCGC CGCCCAGTTC
AAGGCGCCGA TGGCGCTGGT CGAATGCTGC GTCGACCTCG GCCATGAATC GGTCGACACC
CGCTCCAACG CGGCGGAGGC GGCCGACTGG ATCGCGCGGC GGCGCTACCG GTCGATCCGC
CTCGTCACCT CCGACTGGCA CATGGTGCGC GCGCGCTTCG ACCTGCGCAA CGCGACCGGC
GACAAGCTGG AGATCGTTGC CGACGCGGTG CCGACCGAGC CCGGGCTCGT CGACCTGGTC
CGCGAGTACA ACAAATATCT GCTGCGGCGG GTCGCCGCCC TGATCGGGAT ATGA
 
Protein sequence
MIVRAAAAAL LLWIAGFMAF ALFLPQPAPD GIATDGIVVM TGGRGRVERG LRLLEAKRAK 
RLLISGADRR VRPHELAAQF KAPMALVECC VDLGHESVDT RSNAAEAADW IARRRYRSIR
LVTSDWHMVR ARFDLRNATG DKLEIVADAV PTEPGLVDLV REYNKYLLRR VAALIGI