| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2901 |
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| Symbol | |
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| ID | 5200901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3188277 |
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| End bp | 3189143 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582451 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_001263391 |
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| Protein GI | 148555809 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.654674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACC CACGCCCGGT GCCCCGTCCT TTCGATGCAT GGGGCGAGAT TCGGGAAGAA
CTGCAAGGCA TGGGTTTCGA TAGAGGTAAG CGCGGTCCGC GCGGCGGCGG CAGGGACAAG
CGCGACGGCT TCGGTGACGA AAGTTACGGC GGCTATAGTG GTGGCGGTTT CGGCGGTGAC
CGTTTCGGCG GCGGCGGCGG TTACGGCGGC GGCGGCGATC GCTTCGGCGG CGGTGGCGGC
GGCGGTTATG GCGGCGGCGG CGATCGCTTC GGCGGTGGCG GCGGCGGCGG TTTCCGTGGC
GGCGGCGGCG GTGGTGGTGG CTTCGGCGGC GGCGGCGGTC GCGGCGGCAT GCCTGCCCAG
GTGATCGGCG AAGGCAAGGG CGTCGTCAAA TTCTTCAACG GCCAGAAGGG CTTCGGCTTC
ATCGTCCGTG ACGATGGCGG CGAGGACGTG TTCGTGCACA TCTCGGCGGT CGAGCAGGCG
GGCCTCACCG GCCTCGCCGA AGGCCAGCCG CTCGAGTTCA CGCTCGTCGA TCGCGGCGGC
CGCGTCTCGG CGACCGACCT CAAGATCGAG GGCGAGCCGC TCCCGGTCGA GGATCGCGGT
CCGCGCCCGG CGGCTGCCGG CGGCGCCGGC GGCCCGGCCC GTCAGCTCAC CGGTGAGAAG
GCGAGCGGCA CGGTCAAGTT CTTCAACGCG ATGAAGGGCT TCGGCTTCAT CCAGCGCGAC
GACGGACAGC CCGATGCCTT CGTGCACATC TCGGCGGTCG AACGCGCCGG CATGACCAAC
CTCAACGAAG GCGACCGGCT CGAGTTCGAG CTGGAGGTCG ATCGTCGCGG CAAGTACGCG
GCGGTGAACC TCACCCCGCT CGGCTGA
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| Protein sequence | MMDPRPVPRP FDAWGEIREE LQGMGFDRGK RGPRGGGRDK RDGFGDESYG GYSGGGFGGD
RFGGGGGYGG GGDRFGGGGG GGYGGGGDRF GGGGGGGFRG GGGGGGGFGG GGGRGGMPAQ
VIGEGKGVVK FFNGQKGFGF IVRDDGGEDV FVHISAVEQA GLTGLAEGQP LEFTLVDRGG
RVSATDLKIE GEPLPVEDRG PRPAAAGGAG GPARQLTGEK ASGTVKFFNA MKGFGFIQRD
DGQPDAFVHI SAVERAGMTN LNEGDRLEFE LEVDRRGKYA AVNLTPLG
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