| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2240 |
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| Symbol | |
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| ID | 5199126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2496385 |
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| End bp | 2498472 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581786 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001262737 |
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| Protein GI | 148555155 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.778513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCA GGAACCGCAT GCTGGCCGGG CTGCTCGGCA CCGCCTGCCT GTTCGCGGCG
AGCGCCGCCG TGGCGCAGGA GGCCGCCGCC GGCGCCGATC CCGCCGAGGG CAACGACATC
GTCGTCACCG CGCGGCAGCG CTCGGAGAGC CTGCAGCAGG TGCCCGATTC GGTCACCGCC
TTCTCCGCCA GGACGATCGA GGAGGCGGGC ATCCGCAGCA TCGACGACGT CACCGCGCTG
ATGCCGAACA TCTCGCTGGT CGATTCGCAG GACGCCGGCA CGGTCGCGAT CAACATCCGG
GGCATCGGAC AGGTCCGCAA CGGCGAGGCG CCGGTCGCGC TCGTCATCGA CGGGGTCCAG
ATGACCTCGA CCGACATGAT CAAGCAGGCG CTGCTCGACC TCGACCAGAT CGAGGTGCTG
AAGGGGCCGC AGGGCGCGCT CTACGGCCGC AACGCGATCG GCGGCGCGAT CAACATCACC
ACGAAGCGGC CGACCAACGA CCTGCAGGGC CGCGTCTCGG TCGACTATGC CAATGGCGAC
GACCGCCGCC TGTCGGGAAC GCTGAGCGGC GCGCTGGTGC CCGACCGGCT GCTGTTCCGC
ATCGCCGGCG ACTATCGCAA GTTCGACGGC GTCTTCCGCA ACGTCACGCT CGACCGGAAG
GTCGACTTCG TCGAGGACCT CAACCTGCGC GGCCGGCTGA TCTTCACGCC GACCGAGCGG
CTGACGATCG ACCTGCGCGG CGCCTATGGC GACCTCAAGG CGGGCGCCTC CTGGTACATC
CCGCTGCCCG ACGGCCAGCC GAACGACAGC AGCGTGCCGA TCCAGAACGA TTTCCTGGGC
CGCAGTCCGC GCACGGTGAA GGACGGGTCG CTCAAGGTCG ACTATGAATT CGATCCCTTC
ACGCTGAGCT CGATCAGCGC GTTCAACACC ACCCGGATCG ACCTGAGCGA GGACCTCGAC
TGGTTCCCGC AGTCGATCCT CGGCGCGACC CAGCTCCGCC GCTACGAGAG CTTCACCCAG
GAATTCCGCC TGGCTTCCCC CTCGACGCAG AGGCTGCGCT GGACGGCGGG CGCCTATCTG
CTCGACGCGC GGCGGCGGGT CGACACGGTC GTCCTGATCT CGCCCGATCC GACCGCGTCG
AAGCTGCCGC CCTCGGCCTA TATCCCGCTG CCGGCGGCGC GCGCGACCGA GGACATCCTG
ACCAAGGCCG CCTATGCCCA GCTCAACTAC AGCGTCACCG ACACGGTCGA GCTGACCGGC
GCGTTGCGCT ACGACCATGA CCGGCGCGAA CAGACCAACC GGCTCGTGCC GGGGCCGAAG
CGCAAGGCCA ATTTCGACGA ATGGCAGCCG AAGGTCTCGA TCAAATATTC GCCGACCCCC
GACACCATGA TCTACGCGAC GGCGGCGCGC GGCTTCCGCA GCGGCGGCTT CAATCCGCCC
AACGCGGTCT TCCCCGCCAT CTACAAGCCC GAGGTCGCCG ACACGCTGGA GATCGGCAGC
AAGAACAGCC TGCTCGACCG CCGGCTGACG CTCAACGCCG CCGCCTTCTA CATGCGCTAC
AAGGACCAGC AGGTCTTCAT CCTCAACGTC GCCGACCAGG GCATCGTCAA CGTCGGCAAG
ACCGACATCT ACGGCTTCGA ACTGGAGGCG CAGGCGCGGC CGGTCCGTAA CCTCCAGCTC
GGCGCGTCGC TCGGCTTCAT CGACACGAAG ATCAAGGATT TCGACGGCAC CGCGCGGTTC
CGCGGCAACC GGGTGCCGCT CACCTATCGC TGGTCCTATA CCGCGTTCGG CCAGTATCGG
GTGCCGGTCG GCGGCGATCG CGGCATCGTC GCCCGCGTCG ACTATTCGGG CCGGTCGGGC
AATTACTGGC ACATCGACAA TGCCGACCGG CAGGACGCGG TCCACCTCGT CAATGCCCGG
CTGACCTTCG ACGCGAAGCG CTACTCGATC GCGCTCTATG CCACCAACCT GTTCAAGGAG
CGCTACACCG AGGAGTTCTT CGCCAAGGAA TTCTCGGCCG GCGCCGCCGA CATCCGCTAT
CCGGGCCAGC CGCGCCGCTA CGGCGTCTCG GCGACCCTCA ACTTCTGA
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| Protein sequence | MTFRNRMLAG LLGTACLFAA SAAVAQEAAA GADPAEGNDI VVTARQRSES LQQVPDSVTA
FSARTIEEAG IRSIDDVTAL MPNISLVDSQ DAGTVAINIR GIGQVRNGEA PVALVIDGVQ
MTSTDMIKQA LLDLDQIEVL KGPQGALYGR NAIGGAINIT TKRPTNDLQG RVSVDYANGD
DRRLSGTLSG ALVPDRLLFR IAGDYRKFDG VFRNVTLDRK VDFVEDLNLR GRLIFTPTER
LTIDLRGAYG DLKAGASWYI PLPDGQPNDS SVPIQNDFLG RSPRTVKDGS LKVDYEFDPF
TLSSISAFNT TRIDLSEDLD WFPQSILGAT QLRRYESFTQ EFRLASPSTQ RLRWTAGAYL
LDARRRVDTV VLISPDPTAS KLPPSAYIPL PAARATEDIL TKAAYAQLNY SVTDTVELTG
ALRYDHDRRE QTNRLVPGPK RKANFDEWQP KVSIKYSPTP DTMIYATAAR GFRSGGFNPP
NAVFPAIYKP EVADTLEIGS KNSLLDRRLT LNAAAFYMRY KDQQVFILNV ADQGIVNVGK
TDIYGFELEA QARPVRNLQL GASLGFIDTK IKDFDGTARF RGNRVPLTYR WSYTAFGQYR
VPVGGDRGIV ARVDYSGRSG NYWHIDNADR QDAVHLVNAR LTFDAKRYSI ALYATNLFKE
RYTEEFFAKE FSAGAADIRY PGQPRRYGVS ATLNF
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