| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1637 |
|---|
| Symbol | |
|---|
| ID | 5197091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1822311 |
|---|
| End bp | 1823324 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581185 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001262138 |
|---|
| Protein GI | 148554556 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.455476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGA TCAAGATGGT TGCGGCCCGC GCGGGCGTTT CGACGGCGAC CGTGTCGCGC
GCGCTCAGCA ATCCCGACAT CGTCGTCCCG GAAACGCGCG CCAAGGTGCA GGCCGCGATC
GAGGAGCTCG GCTACGCTCC CAATTTCGCG GCGAAGAGCC TGCGGATGCT GCGCACCTCG
AAGATCGTCA TGATGGTGCC CGACGTCTCC AATCCCTTCT TCTCGGAGGT CCTGCGCCGG
GCCGAGGACA TGGCCGAGCA GGCCGGCTAT TCGGTGCTGC TGGGCGACAC CCGCGACGAC
GCCAACCGGG AAGCCCAGTT CGCCGACATG CTCCAGCGCA AGGAAGTGGA CGGGGTGATC
TTCCTCGGCC ACCGCATGCC GGTGACGCTG GTCAACGCGG TCAAGGACAA GGGGCCTCGG
GCGCCGATCG TCAACAGCTG CGACTTCTCC CCGGCCTTCG GCGTTTCCGG CGTGCATATC
GACAATGTCC GCGCGGCGCA GGAGGCGATG GCGCTGCTCC AGTCGATGGG GCATCGGCGG
ATCGGCATCA TCACCGGCCC CGTCGAAAGC AACATCACCA GCGACCGGCT GACCGGGGTG
AAGCGCGCCG CCGAGACGCC GGGACGCGAG ACCGAGCTGC TGATCCGCCA TGCCGATTAC
ACGATCGAGG CCGGACAGCG GGAGACCGAG CGCCTCCTCG CCCTGCCCGC GCGCCCGACC
GCGATCTTCT GCTTCAGCGA CGAGATGGCG GTGGGCGCGC TCGCCGCGTG TCGCGCCTAT
GATCTCCAGT GCCCGCGCGA CCTGTCGATC GTCGGCTTCG ACGACATCCG CTACGCCCGC
TATCTCGATC CGCCGTTGAC GACCGTGCGC CAGCCCATGG AGCTGATCGG CAAGACCGCC
GTCAGGCTAT TGCTCGCCAT CATCGACGGC ACCGCCACCG AAACCCGGGT GGTGACGCTG
GACCATGAAC TGGTCGTGCG CGGCAGCACC GGTCCGGCTC CCGTACTCCG CTGA
|
|---|
| Protein sequence | MSTIKMVAAR AGVSTATVSR ALSNPDIVVP ETRAKVQAAI EELGYAPNFA AKSLRMLRTS
KIVMMVPDVS NPFFSEVLRR AEDMAEQAGY SVLLGDTRDD ANREAQFADM LQRKEVDGVI
FLGHRMPVTL VNAVKDKGPR APIVNSCDFS PAFGVSGVHI DNVRAAQEAM ALLQSMGHRR
IGIITGPVES NITSDRLTGV KRAAETPGRE TELLIRHADY TIEAGQRETE RLLALPARPT
AIFCFSDEMA VGALAACRAY DLQCPRDLSI VGFDDIRYAR YLDPPLTTVR QPMELIGKTA
VRLLLAIIDG TATETRVVTL DHELVVRGST GPAPVLR
|
|---|
| |