Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1374 |
Symbol | |
ID | 5200676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1517323 |
End bp | 1518153 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580920 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001261876 |
Protein GI | 148554294 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CCATCCTCAT CACCGGAACC TCGTCGGGCT ATGGCAAGGC GACCGTCGAC CATTTCCTCG ATCGCGGCTG GAACGTGATC GCGACCATGC GGCGGCCCGA CCCGGCTGTC TTCCGGGCAT CGGACCGGCT GAAGCTGGTC CGGCTCGACG TCACCGACCG GGCGAGCATC GACACGGCGA TCGCCGAGGG GGTGGCGGCT TTCGGGGCGA TCGACGTGCT GGTGAACAAT GCCGGGATCG GCATGGCCTC CGCCGTCGAA GCCACCCCCG ACAGCACGGT CCGCGAGGTC TTCGAGACAA ACTGCTTCGG CGTCATGGCC ACCTGCCGCG CGATCATCCC GCAGATGCGG CGGCAGGGGC ACGGCATTAT CGTCAACGTC ACGTCAAGCG TGACCATCGG GGTCATGCCG CTCGTCGCCG TCTACGCCGC GAGCAAGTTC GCCGTGGAGG GTTTCACCGA GTCCCTGGCC TATGAGCTCG CGCCGTTCGG TATCACCGCC CGGCTGGTCG AGCCGGGCTA TGCCCCGACC ACCAGCTTCA CCGCCAATGG CGGTGCCCGG ATGGAGGGGC TGATCCCGGC CGATTATGCG CCCTTCGCCC AGGCCTGCTT CACCCGCATG GCGGACTATC CCACCGCCTA TTGCAGTGAA GCCGAGGTGG CCGAGGCCGT CTTCGCCGCG GCGACCGAGG AGGGCGGCAA GCTGCGCTAT CCGGCGGGGG CCGACAGCAA GATGCTCAAC GAGCTGCGCT GGTCGACCTC GGAAGAGGAG TATCTGGCGC GGATGCGGGC GATGTTCGCG CCACGACCCG ATCCGTCCTA G
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Protein sequence | MTSTILITGT SSGYGKATVD HFLDRGWNVI ATMRRPDPAV FRASDRLKLV RLDVTDRASI DTAIAEGVAA FGAIDVLVNN AGIGMASAVE ATPDSTVREV FETNCFGVMA TCRAIIPQMR RQGHGIIVNV TSSVTIGVMP LVAVYAASKF AVEGFTESLA YELAPFGITA RLVEPGYAPT TSFTANGGAR MEGLIPADYA PFAQACFTRM ADYPTAYCSE AEVAEAVFAA ATEEGGKLRY PAGADSKMLN ELRWSTSEEE YLARMRAMFA PRPDPS
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