| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0181 |
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| Symbol | |
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| ID | 5200707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 172259 |
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| End bp | 172963 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579720 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001260690 |
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| Protein GI | 148553108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACGC CTGCCGCCCT GGCGCTTGGC GTCATTGCAG CGGTCGTTTC GGCCGCGCCT
GCCGACGCGC AATCCGCCTC GCCGCGCGGT GCCTCGGCCT GCGCCGTCCA TGCGCCGGAG
GCGGCAAGTC GCGCCCGGCT GCCCGTCGAT GTCGTACTGC GCGTCATGCG CGCCGAGAGC
GCTGGCAACC CGCGTGCCGT CTCGCACAAA GGCGCGATGG GCTGCATGCA GATCATGCCC
GGAACCTGGG CCGATCTCAC CCGGCGCCAC GGACTTGGGC GCGACCCGTT CGATCCGCGC
ATGAACATGA TCGGCGGTGC GCTCTATCTC GCCGAGATGG TCGCGCGGTT CGGATTGCCG
GGCGCCTACT CGGCCTACAA TGCCGGGCCG GGACGCTATC AGCGCCATAT TGCGAACGAC
GTTCCGCTGC CCCGCGAGAC CATCGCATAC ACCGCGCGCG TGACCGGCGC GGCGCCATCG
CGAGGTGCCG TTCCGGCCGC GCCACGATGG CAGGACGCGG GCCTGTTCAT GGCGCAGTCC
GACGTGCCAC GATCGAGCCC GGCGCGGGTC GGCAATGACG GCGATCGGAC GGCACATTCG
CGTCACGATG CGACCGCGCA CTCCAGCGGT GTGCTGTTTC CGCTCGCGGG GCCCGTGCGC
GATGCGTCCG AGCCGGGGCG CGCCGGCATC GGGACCGAGC CTTAG
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| Protein sequence | MKTPAALALG VIAAVVSAAP ADAQSASPRG ASACAVHAPE AASRARLPVD VVLRVMRAES
AGNPRAVSHK GAMGCMQIMP GTWADLTRRH GLGRDPFDPR MNMIGGALYL AEMVARFGLP
GAYSAYNAGP GRYQRHIAND VPLPRETIAY TARVTGAAPS RGAVPAAPRW QDAGLFMAQS
DVPRSSPARV GNDGDRTAHS RHDATAHSSG VLFPLAGPVR DASEPGRAGI GTEP
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