Gene Swit_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0031 
Symbol 
ID5200508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp30629 
End bp31009 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID640579568 
Producthypothetical protein 
Protein accessionYP_001260542 
Protein GI148552960 
COG category[S] Function unknown 
COG ID[COG3801] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.247027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGG ATGATCCCAG GGCGGTCCAT GCGCGGGTCG GCGCGCTCGC CAAGGCGCTG 
CCGCAGGTCG AGGAGAAGGT CTCGCACGGG TCGCCCTGCT GGCGCGTCGC CGACAAGCGG
ATGTTCGCCT ATTTCTGGCA CAACCACCAC GGCGACGACC GCACCGCGCT GCTGGTCAAG
ACGAGCGGCA TCGAGGAGCA GGAGATGCTC ATCGACCTCG ATCCGGACAT CTATTTCAAG
CCGCCCTATC TGGGTCCGTC GGGCTGGATC GGCGTCCGGC TCGACCAGCC CGATACCGAC
TGGGAGCAGG TGGACCATCG CCTGCGCGAA AGCTGGCGCC TGGCCGCGCC GCCCAAGCTG
GCGGCGGTGA TGGAATTCTA G
 
Protein sequence
MASDDPRAVH ARVGALAKAL PQVEEKVSHG SPCWRVADKR MFAYFWHNHH GDDRTALLVK 
TSGIEEQEML IDLDPDIYFK PPYLGPSGWI GVRLDQPDTD WEQVDHRLRE SWRLAAPPKL
AAVMEF