| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5286 |
|---|
| Symbol | |
|---|
| ID | 5195830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 185894 |
|---|
| End bp | 186982 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640579213 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001260161 |
|---|
| Protein GI | 148550722 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.365819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.925115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAG CGCCTTTGCT CGCCGCCGGC ACGCTTGTCT CCGCGGCTCT TGCCTTCGCC
GCGCTCGGGC CCGTAGCGGC GCCGGTTTTG GCGGCGGCGG CGCAGGGCCA GCCGGGCATC
CCGGCGAGCG GCGCCAAGGT CGACGCCGAC AACCAGGCCG TTCTCGATGC CTTGAAAGGG
CTTGGCCTGC GGCCCTACCA CACGCTCAGT CCGGCCGAAG CGCGCCTGCA ACCGAGCTTC
GCCGACGGGG TAAAGGCCGT GCTCCAGAAG CAGGGTCGCC CGGTTGCGCC TCCACCCGGC
GTCGCGACGC AGGATATCCA GGTAGCCGGC GGGGCGGGTC CGATCCCAGC ACGGGTCTAT
CGACCGGCCG ACGCACAAGG TCCCCTTCCC GTCATCGTCT ACTACCATGG CGGCGGATGG
GTGCTCGCGA CCATCGACAC CTATGATGCC TCGGCCCGTG CCCTCGCCCG AGAAGCGCGC
GCGATCGTGA TCTCGGTCGA ATATCGCAAG GCGCCCGAGG CGAAATTCCC GGCTCAGCAC
GACGACGCCC TCGCGGCATA CCGCTGGGCG CTCGGCCATG CCGGCGAGAT CGGTGGTGAC
CCGCGCAAGA TCGCGCTCGC GGGCGAAAGC GCCGGCGGCA ACCTCGCCCT CGCGACCGCG
ATCGCCGCGC GCGATGCCAA GTTGCAAAAG CCCGCGCATG TATTGACCAT CTATCCGATC
GCCGGTTCCG ACCTCAACAC CCCCTCCTAT CAGGAAAACG CGAATGCCAT GCCGCTCAAT
CGGGCGGCCA TGGCCTGGTT CCTCCATCAC ACGACGCGCG GCCCGGCTGA CGCAACCGAT
CCGCGCATCA ATCTCGTCGC GGCAAACCTG CGCGGTCTCC CGCCCGTGAC CCTCATCCAG
GCCCAGATCG ATCCGTTGAC GTCCGAGGGC CAGACGCTTG CAGGCCGGCT GCGCGCCGCG
GGTGTGCCGG TTGCAACGCA GCTCTATCCT GGCGTTACGC ATGAGTTCTT CGGCGCCGAT
GCGGTGATCC GTAAAGCTGG AGAAGCCCAG CGCTTCGCCG GCACACGGCT GAAGGCGAGC
TTTCGTTGA
|
|---|
| Protein sequence | MRKAPLLAAG TLVSAALAFA ALGPVAAPVL AAAAQGQPGI PASGAKVDAD NQAVLDALKG
LGLRPYHTLS PAEARLQPSF ADGVKAVLQK QGRPVAPPPG VATQDIQVAG GAGPIPARVY
RPADAQGPLP VIVYYHGGGW VLATIDTYDA SARALAREAR AIVISVEYRK APEAKFPAQH
DDALAAYRWA LGHAGEIGGD PRKIALAGES AGGNLALATA IAARDAKLQK PAHVLTIYPI
AGSDLNTPSY QENANAMPLN RAAMAWFLHH TTRGPADATD PRINLVAANL RGLPPVTLIQ
AQIDPLTSEG QTLAGRLRAA GVPVATQLYP GVTHEFFGAD AVIRKAGEAQ RFAGTRLKAS
FR
|
|---|
| |