| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_0291 |
|---|
| Symbol | |
|---|
| ID | 5202466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | + |
|---|
| Start bp | 303638 |
|---|
| End bp | 306769 |
|---|
| Gene Length | 3132 bp |
|---|
| Protein Length | 1043 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640577337 |
|---|
| Product | AcrB/AcrD/AcrF multidrug efflux protein |
|---|
| Protein accession | YP_001258316 |
|---|
| Protein GI | 148559977 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.601595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAACA AGAACCCTTC TTCCGGCGGT TCGACGGCGC TTTTCATCCG CCGCCCCGTC
TTTGCCTTCG TCATCAATAT CCTGATCGTT GTGGCGGGCC TTGCAGCCTT TACCGGCGTC
GATATCCGTG AATTGCCGGA TGTGGATCGG CCGGTCATCA CGATCAGCAC GGATTTTAGC
GGCGCATCTG CCGAAACCAT CGACCGTCAG GTCACACAGG TTCTGGAAAA TGCGGTCGCG
CGTGTTTCCG GCGTGAAATC GATTTCCTCC ACCTCCTCCT TCGAGCGCAG CCGCGTGACG
GTGGAGTTCA ACGATGGCGT CGATCTCAAC GTCGCCGCCG CCGATATGCG CGATGCGATT
TCCCGCGTCG CCAACAATCT GCCGGAAGAA GCCGATCCCT CGCGCATCAT CAAGGCGGAT
TCCAACGCCG ATCCGGTGAT GCGCCTTGCC GTTACCTCCG ACACCATGGC GGTCGATGAC
ATGACGGTGC TGGTGGAAGA TCAGATCGAG GACGTGCTTT CCGCCGTGCC CGGCGTCGCC
GACGTGCAGA TCAACGGTGA CCGCGACAAG ATTTTCCGCA TCGATATCGA TCAGGCCCGG
CTTGCAAGCT ACGGTCTCAC CATTGCTGAT ATTTCCAACG CGCTTTCGTC GATGGGGCTG
GATGCGCCCG CAGGTTCGCT TCGCAGTTCC GACCAGTCCA TCGTGGTGCG CGCCACCGCC
AATCTGGAAA AGCCGGAAGA TTTCGAGAAT GTCTATATCA AGGGGCGCAC GCAGATCCGC
GATGTTGCGA CAGTCACCCT TGGGCCGGAT ATCGAAAGCT CGGCGGTGCG CTCCAACAGC
AAGACCGCCA TCGGCCTCGG CATCGTGCGT CAGGCGCAGT CGAACACGCT CGATATTTCG
CAAGGCGTGC GCGCAGCCGT TGCCAATTTG CAGAAAACCC TGCCGGAAGG GGTCAGCATT
GCCGTTACCA GTGACGATGC GAACTTCATC AACGGCGCCA TCCATGAAGT CGAAATCGCG
CTGATCGCGT CGGTGATTAT CGTCGTTGCC ATCATCTTCA TGTTTCTGTG GGATGCGCGC
GCGACACTGA TCCCCGCGCT CTCCATGCCG GTCGCCCTGA TCGGCACCAT TGCGGCGATC
TATCTGGTGG GCTTCTCGGT CAATATCCTC ACGCTTCTGG CGCTGGTACT TGCCACGGGC
CTCGTGGTGG ATGATGCCAT CGTGGTTCTG GAAAACGTGG TGCGCCGCCG CAATCAGGGC
ATGGGGCCGC GCGCCGCAGC CGTGCTCGGT ACGCAGGAAG TGTTCTTCGC CGTCATCGCC
ACCACGCTTA CGCTTGCTGC CGTTTTCGTG CCGATTTCCT TCCTGCCGGG GCAGGCGGGC
GGCCTGTTCC GCGAATTCGG CTTCGTGCTG GCAATTGCGG TTCTTCTTTC CTCCGTGGTC
GCGCTCACAC TTTGCCCCAT GCTCGCCTCG CGCTTCCTGA AGGAAGCAAG CGCCACGGTG
GAAAGCGAAG GGCATGGCCC GCTCTTCCTG CGCCGCATTG GCGGCGGCTT GGCGAATTTC
TATCGCAAGA CGCTTCATGC CTGCCTTTCG GCGCCCTTTA TCGTCGTGCT GGTGGCAGTG
CTTTTCGCCG GTGCGTCCTA TGTCGGCTAT GGCCTGATCC GCCAGGAACT CACGCCTTCG
GAAGACCGCG CGGTGGCGCT TCTGCGCATC AACGGGCCGC AGGGCATCAG TGTCGAATTC
CTTCAGTCCC AGCTCGACAA GATCGAGGAA GCGATCCAGC CCCTGCGCGA TAGCGGTGAA
ATCACCACCA CCTACGCGAT TGCCGGTTCA GGTGGCTCGT CCAATAATGG TTTTGTGGTG
CTGACGCTTG CCTCCTGGAA GGAGCGCCAG CGTTCCCAGC AGGAAATCAT GGCCGACATC
ACCAACCGGA TCAAAGGCAT TACGGCGGTG CGCGTCTTTA CCACGCAGCC CAACAGCCTT
GGTATTCGCG GCGCGGGCAA TGGTCTGCAA TTCGCTATTG TCGGTGGTGA ATATGCCAAA
CTCCAGCCTG CCGCGCAGGC GGTGGTGGCG GCGCTGGAGA AAGACCCGCG CTTCGTGCAG
CCCCGCCTGT CGGTGGAGCC GACACAGGCG CAGATTTCGG TGGAGATCAA CCGCGAGCGT
GCTTCCGATC TGGGCATCGA TATCACCGGC CTTGCCAATG CCGTGCAGGC GGTTCTCGAT
GGCCGCAAGA TCGGTTCGGT CTATGTGGGC GACCGCAGCT TCGATGTGAA GCGCGTCTCG
ACCACCAACC CGATCAACGA TCCGACCGAT CTTGAAAATA TTTTCATGAA AACAGCGGAT
GGCCGCTATG TGCCGATGTC ATCCATTGCA AGCGTTGTCG AAAAGGCTGT TCCGCCACAG
CTTAATCGGG AGTTGCGCCA GCGTTCCGTG GCGATCACCA CCAATCTGCG TGACGATTTT
GCGCTCGGTA ACGCCTTTGC GGCGGCGCAG GAGATTGCCG CCCCGCTTCT GCCGCCCGGC
AGCCACATCA TCCCGCTTGC CGAAGCGTCC ACGCTCAGCG AAACGTCGAG CGGCATGGCC
ATCGTGTTCG GCTTTGCTAT CGTTATCATT TTGCTGGTGC TGGCAGCACA GTTTGAAAGC
TTCATCAGCG CGTTGATCGT CATGGCCACG GTACCTTTGG GCCTGGGCTG TGCAGTCTTC
GCCATGATCC TCACCGGCAC GAGCCTCAAC GTCTATAGCC AGATCGGCCT TGTGCTGCTT
GTCGGCATCA TGGCCAAGAA CGGCATTCTC ATCGTGGAAT TCGCCGACCA GTTGCGCGAC
AAGGGCCTGA ATGTTCGCGA GGCAATCGAG GAGGCGGCGA ATATCCGCCT GCGTCCCGTC
TGCATGACGA TGATCTGCGC GGTCCTGGGC GGCGTGCCGC TGGTGCTGGC AAGCGGCGCG
GGCGCAGAAG CCCGCGTGGC GCTTGGCTGG GTCATCGTTG GCGGATTGGG TCTTGCGACC
ATCGCCACGC TTTATGTGAC GCCTGTTGCC TATCTCCTGC TTGGCCGTTT CACCAAGCCA
AAGGTTGAGG AAGAGGAACG GCTGGAACGC GAGCTTGTCC GCGCCGAGGC TCTGGAAGAA
AAACTCAAAT AG
|
|---|
| Protein sequence | MSNKNPSSGG STALFIRRPV FAFVINILIV VAGLAAFTGV DIRELPDVDR PVITISTDFS
GASAETIDRQ VTQVLENAVA RVSGVKSISS TSSFERSRVT VEFNDGVDLN VAAADMRDAI
SRVANNLPEE ADPSRIIKAD SNADPVMRLA VTSDTMAVDD MTVLVEDQIE DVLSAVPGVA
DVQINGDRDK IFRIDIDQAR LASYGLTIAD ISNALSSMGL DAPAGSLRSS DQSIVVRATA
NLEKPEDFEN VYIKGRTQIR DVATVTLGPD IESSAVRSNS KTAIGLGIVR QAQSNTLDIS
QGVRAAVANL QKTLPEGVSI AVTSDDANFI NGAIHEVEIA LIASVIIVVA IIFMFLWDAR
ATLIPALSMP VALIGTIAAI YLVGFSVNIL TLLALVLATG LVVDDAIVVL ENVVRRRNQG
MGPRAAAVLG TQEVFFAVIA TTLTLAAVFV PISFLPGQAG GLFREFGFVL AIAVLLSSVV
ALTLCPMLAS RFLKEASATV ESEGHGPLFL RRIGGGLANF YRKTLHACLS APFIVVLVAV
LFAGASYVGY GLIRQELTPS EDRAVALLRI NGPQGISVEF LQSQLDKIEE AIQPLRDSGE
ITTTYAIAGS GGSSNNGFVV LTLASWKERQ RSQQEIMADI TNRIKGITAV RVFTTQPNSL
GIRGAGNGLQ FAIVGGEYAK LQPAAQAVVA ALEKDPRFVQ PRLSVEPTQA QISVEINRER
ASDLGIDITG LANAVQAVLD GRKIGSVYVG DRSFDVKRVS TTNPINDPTD LENIFMKTAD
GRYVPMSSIA SVVEKAVPPQ LNRELRQRSV AITTNLRDDF ALGNAFAAAQ EIAAPLLPPG
SHIIPLAEAS TLSETSSGMA IVFGFAIVII LLVLAAQFES FISALIVMAT VPLGLGCAVF
AMILTGTSLN VYSQIGLVLL VGIMAKNGIL IVEFADQLRD KGLNVREAIE EAANIRLRPV
CMTMICAVLG GVPLVLASGA GAEARVALGW VIVGGLGLAT IATLYVTPVA YLLLGRFTKP
KVEEEERLER ELVRAEALEE KLK
|
|---|
| |