| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1532 |
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| Symbol | |
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| ID | 5170689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1519107 |
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| End bp | 1521053 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564059 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001245116 |
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| Protein GI | 148270656 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0217049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAT ACCGGATAAG GCCCAAGGAA GCGAATCTTT CTTTTCTGGA AGATCTGGAT
GAGGAACAGA GAAAAGCAGT CGTTGAATCA GAGGGAAGAT GCATTGTAAT AGCAGGCCCG
GGGTCTGGGA AAACCCGGGT TATCACGTAC AAGATCGCCT ATCTTCTGGC GAACGGTGTG
GATCCTTCCA GGATTCTTCT GGTCACGTTC ACCAGAGCAG CGGCGCGGGA AATGGTAGAG
AGAGCGAAGA CGGTGACCGG AAGAGAGCTT TCTGAGATGC TCGCCGGAAC GTTCCACCAT
GTGTGCAACT ACTTTTTGAG AAAGTACGCA CCTTACGTGG GTTTGGAACG AAATTACTCT
ATCCTGGACA GAGAAGACGC GGAGAGCCTC ATGAGGCATG CAAGAAGCAA GTACCTCGAA
AGAAAGAGTA AAGAAGAGAG AAAAAACTTC CCCCAGCCTT CTGTTTTGAT GGCTATATAT
TCTTATATGA AAAATACTCT CAAATCTTTG AGGGAAAGTA TCGTAGTGAA GAATCCAAAG
TTTCTGGACT TGAAAGAAGA AATCTCGGAG ATCTTCGATC TCTACGAACA GGAAAAACGC
TCTCAAAATG TGGTGGACTA CGAAGACCTT CTCTTCTACG CTTACAGACT CTTAGAAGAG
AACAAAGAAA TAAGAGATCG AGAGGCGGAA AGATTCCTTT GGGTACTCGT TGATGAGTTC
CAGGATACCA ACTACGTTCA GTACAGGATA GTGGAACACC TATCGTCGAA ACACGGCAAC
GTCCTGGCGG TTGGAGACGA TGCCCAGAGT ATTTACTCCT TTCGAGGGGC AAGGTACGAA
AACGTTGAAG ATTTCATAAA GGTATCCGGA ACAAAAATCT TCAAGATCCA GACGAACTAC
AGAAGCACGG AAAGTATTGT GAAATTCATA AACGCCATGC TTCCGAAAAA ATCCGTTCCA
AAAGAACTGA AGCCGGTAAA GAAGGATGGT ATGAAACCTG TTGTTGTCAA GACCTGGGAT
AGATACGAAG AAGCGCGGTT CGTGTCTCAG AGGATTCTCG AGTTAATAGA AGAAGGGTTC
AAACCAGAAG AAATCGCAGT TCTCTACAGA TCACATTCGC ACTCTCTGGA GCTTCAGATG
GAACTCGTTC GAAGTAGAAT AGATTTCCGT GTGTTGTCTG GTCCCAGATT CACCGAGAGC
GCCCACGTGA AGGACGTTCT TTCTTTTCTC AGAATCGTTC AAAATCCAAG GGACAAATCC
GCATGGTTGA GGACTGCAAA GCTCTTCTAC GGGATCGGTG ACAGAACGGC TTCGAAGATA
GCGGATCTCG CCAGCGCTTA CGTGGAAGAA GGTCTGGATC CCTTCCAGGA ACTGAAGAAA
GTGAGTTTCA GTGGTGAGTA CAGCAGGTTT ATCGATATTC TCGATCAGAT CAGAAAGCTC
GATTCTCCTG GGGAAATGAT AGAGCGCGTC CTGTCTTCTT TTTATTCCGA ATATCTGGAA
GCGAGGTATC CTGATTTCCG TGAAAGGGAG ATGGATCTGG AAAGGCTCGT TGAAATAGCG
TCTCGCTACA CAAGTCTCGA ATCCTTCCTG ACGGATCTTG CTGTGACGGA AAACGTTGAA
ATAGAAAGAG AAATCTCTCA AAAAGAGGGA AAGGTCACTC TCACCACCGT TCATCAGGCA
AAAGGGCTCG AGTGGAGAGT CGTTTTTGTC ATCTCTGTGA ATCCCGGAGA CTTTCCGAAT
TATTTCGCGA TATCCGAAGG GAATCTCGAT GAGGAAGAGA GGATCTTCTA CGTTGCCATA
ACAAGAGCAA AGGAACAGCT GTATATTTCC TACCAGGTCA CCGGAACCTC CTACCCATAC
CGCGGAAACA GGTTCATCAT GAGAAGCGGA GAGAATTTCA TTGACAGAAT ACCGCTTGAA
CTCGTCGAGT TTTGGGAAGT GAAATGA
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| Protein sequence | MKEYRIRPKE ANLSFLEDLD EEQRKAVVES EGRCIVIAGP GSGKTRVITY KIAYLLANGV
DPSRILLVTF TRAAAREMVE RAKTVTGREL SEMLAGTFHH VCNYFLRKYA PYVGLERNYS
ILDREDAESL MRHARSKYLE RKSKEERKNF PQPSVLMAIY SYMKNTLKSL RESIVVKNPK
FLDLKEEISE IFDLYEQEKR SQNVVDYEDL LFYAYRLLEE NKEIRDREAE RFLWVLVDEF
QDTNYVQYRI VEHLSSKHGN VLAVGDDAQS IYSFRGARYE NVEDFIKVSG TKIFKIQTNY
RSTESIVKFI NAMLPKKSVP KELKPVKKDG MKPVVVKTWD RYEEARFVSQ RILELIEEGF
KPEEIAVLYR SHSHSLELQM ELVRSRIDFR VLSGPRFTES AHVKDVLSFL RIVQNPRDKS
AWLRTAKLFY GIGDRTASKI ADLASAYVEE GLDPFQELKK VSFSGEYSRF IDILDQIRKL
DSPGEMIERV LSSFYSEYLE ARYPDFRERE MDLERLVEIA SRYTSLESFL TDLAVTENVE
IEREISQKEG KVTLTTVHQA KGLEWRVVFV ISVNPGDFPN YFAISEGNLD EEERIFYVAI
TRAKEQLYIS YQVTGTSYPY RGNRFIMRSG ENFIDRIPLE LVEFWEVK
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