| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1167 |
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| Symbol | |
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| ID | 5170325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1190313 |
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| End bp | 1192673 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563686 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244757 |
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| Protein GI | 148270297 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAGAA TCGACCTGAA CGGTTTTTGG AACGTCAGGG ATAATGAAGG GAGATTTTCA
CTTGATGGAA CTGTGCCAGG AGTTGTTCAG GCAGACCTGG TCAGAGAAGG TCTCCTTCCA
CACCCGTACG TTGGGATGAA CGAAGATCTC TTCAAAGAAA TAGAAGACAG AGAGTGGATC
TACGAAAGGG AGTTCGAGTT CAAAGAAGAT TTAAAAGAAG GGGAACGTGT CGATCTTGTT
TTTGAGGGTG TTGATACGTT GTCAGATGTC TATCTGAACG GTGTTTACCT TGGAAACACT
GAAAACATGT TCATTGAGTA TCGCTTCGAT GTCACGAACA TATTGAGAGA AAAGAATCAC
CTGGAGGTGT ACATAAAATC TCCCATCAGA GTTCCAAAAG CTCTCGAGCA GAACTACGGA
GTTCTCGGCG GACCAGAAGA TCCCATTAGA GGCTACATAA GAAAAGCCCA GTACTCGTAC
GGATGGGACT GGGGCGCCAG AATCGTCACA AGTGGTATAT GGAAACCCGT TTACCTCGAA
GTGTACAGAG CACGTCTTCA GGATTCAACG GCTTATCTGC TGAAACTTGA GGGTAAAGAT
GCCCTTGTGA GGGTGAACGG TTTCGTATAC GGGGAAGGGA ATCTCAGTGT AGAAGTCTTT
GTGAACGGTG AGAAGACAGG GGAATTTCCC GTTTTCGAAA AGAACGGAGA AAGACTCTTC
GATGGAGTGT TCCACCTGGA AGATGTGAGG CTCTGGTATC CGTGGAACGT GGGGGAACCG
TACCTGTACG ATTTCGTCTT CGTGTTGAAA GACTCAAACG GAGAGATCTA CAGGGAAGAA
AAGAAAATCG GTTTGAGAAG AGTCAGAATC ATTCAGGAGC CCGATGAAGA AGGAAAGACT
TTCATATTCG AAATCAACGG TGAGAGAGTC TTCGCGAAGG GTGCCAACTG GATTCCCTCG
GACAACATCC TCACGTGGTT AACAGACGAA GATTACGAAA AGCTCGTCAA AATGGCGAGG
AGTGCCAACA TGAACATGCT CAGAGTCTGG GGAGGAGGTA TTTACGAGAG AGAGATCTTC
TACAGGCTCT GTGATGAACT CGGTATCATG GTATGGCAGG ATTTCATGTA CGCGTGTCTT
GAATATCCGG ATCATCTTCC GTGGTTCAGA AAACTCGCAA ACGAAGAAGC AAGAAAAATT
GTGAAAAAAC TCAGATACCA TCCTTCCATT GTTCTCTGGT GCGGAAACAA CGAAAACAAC
TGGGGATTCG ATGAATGGGG AAATATGTCC AGAAAAGTGG ATGGTATAAA TCTCGGAAAC
AGGCTTTATC TTTTCGATTT TCCAAAGATC TGTACTGAAG AAGACCCATC CACTCCCTAC
TGGCCGTCCA GCCCTTACGG CGGCGAAAAG GCGAACAGCG AAAAAGAAGG AGACAGACAC
GTCTGGTATG TGTGGAGTGG ATGGCTGAAC TACGAGAACT ACGAAAAAGA CACCGGAAGG
TTCATCAGCG AGTTTGGATT TCAAGGTGCT CCCCATCCAG AGACGATAGA GTTTTTCTCA
AAACCTGAGG AAAGAGAGAT ATTCCATCCT GTCATGCTGA AGCACAACAA ACAGGTGGAA
GGTCAGGAAA GGTTGATCAG GTTCATATTC GGGAATTTTG GGAAGTGTAA AGATTTCGAC
AGTTTTGTGT ATCTGTCCCA GCTCAACCAG GCGGAGGCGA TCAAGTTCGG TGTTGAACAC
TGGCGAAGCA GGAAGTACAA GACGGCTGGT ACTCTCTTCT GGCAGCTCAA CGACAGCTGG
CCGGTTTTCA GCTGGTCCGC AGTCGATTAC TTCAAGAGGC CCAAAGCTCT CTATTATTAC
GCGCGGAGAT TCTTTGCGGA AGTTCTACCC GTTTTGAAGA AGAGAGAAAG CAAAATAGAA
CTTTTGGTGG TGAACGATCT GAGGGAGACG AAGGAGGTCT CTCTCAGGCT TGCGGCCTAT
GAGAGGACGG GAGAAAAAGT ATTCGAGAAG ACTTACAGAA CTGTACTTCC AGCAGACGGT
GTGTGTTCGG TTGATAGAAT TGAATTGCCC GATGATCTTT TCTTCTTCGT CGAGGCGGAA
ATTGATGGGG TTAAATACAG AAACTACAGG GTTTTCAGAA AGTGGCGCGA TCTGGAACTT
CCAGATCCGG AGATTTCGCT TGAGGACATG GGAGATTTTA TAGAATTGAC AGCGAAAAGC
CCCGCTTTTG GTGTCAAGAT TCTCTCCGAT GAAGTACCTG AAGACGATTT TCTGTTCCTG
GAACCGGAAA AGAGTATCAC GATAAAGAAA CCAGATGGAA TAAGAGGAGT GAAATCTCTG
TATGATTATT TGAAACGATG A
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| Protein sequence | MKRIDLNGFW NVRDNEGRFS LDGTVPGVVQ ADLVREGLLP HPYVGMNEDL FKEIEDREWI
YEREFEFKED LKEGERVDLV FEGVDTLSDV YLNGVYLGNT ENMFIEYRFD VTNILREKNH
LEVYIKSPIR VPKALEQNYG VLGGPEDPIR GYIRKAQYSY GWDWGARIVT SGIWKPVYLE
VYRARLQDST AYLLKLEGKD ALVRVNGFVY GEGNLSVEVF VNGEKTGEFP VFEKNGERLF
DGVFHLEDVR LWYPWNVGEP YLYDFVFVLK DSNGEIYREE KKIGLRRVRI IQEPDEEGKT
FIFEINGERV FAKGANWIPS DNILTWLTDE DYEKLVKMAR SANMNMLRVW GGGIYEREIF
YRLCDELGIM VWQDFMYACL EYPDHLPWFR KLANEEARKI VKKLRYHPSI VLWCGNNENN
WGFDEWGNMS RKVDGINLGN RLYLFDFPKI CTEEDPSTPY WPSSPYGGEK ANSEKEGDRH
VWYVWSGWLN YENYEKDTGR FISEFGFQGA PHPETIEFFS KPEEREIFHP VMLKHNKQVE
GQERLIRFIF GNFGKCKDFD SFVYLSQLNQ AEAIKFGVEH WRSRKYKTAG TLFWQLNDSW
PVFSWSAVDY FKRPKALYYY ARRFFAEVLP VLKKRESKIE LLVVNDLRET KEVSLRLAAY
ERTGEKVFEK TYRTVLPADG VCSVDRIELP DDLFFFVEAE IDGVKYRNYR VFRKWRDLEL
PDPEISLEDM GDFIELTAKS PAFGVKILSD EVPEDDFLFL EPEKSITIKK PDGIRGVKSL
YDYLKR
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