Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0946 |
Symbol | |
ID | 5171758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 969207 |
End bp | 970028 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640563464 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001244540 |
Protein GI | 148270080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA AAATGGGTGA GATCATACTT CACGGGGTGA TGATTCTTCT TGCCTTGATA TGGATATATC CGTACGCATG GCTTTTCCTT TCGTCTATAA AACCTTCTGA AGAGATATTC ACACGATTTT TTCCCTCTAG AGTCACTCTG GAGCACTACA AGTACATCTT CACAATGGCA GAGAAAATGG AAAGGCCATT TCTGAGAGCT TTTTTTAACA GTTTGTTTGT AACTCTCACA GTTACTTTCT CCGTGGTTTT CACTTCTTCC ATCATTGCCT ATGGACTTTC AAAGTTAAGG TTCAAGGGAA GCAATGCTGT CTTCAACTTC ATAATTTTCC AAATGCTCTT TCCTGGGTTC ATGTTCATAA TCCCATTGTT CGTTCTCATA AGAAAACTGG GTCTCTACAA CACTTACTCT GCGATGATCG TTCCGTTTCT CATGAGTGCA TGGAGCCTCT TCATGTTAAC ACAGTCCTAT AAAACGATTC CTCAGGATTA CATAGAAGCC GCCAAAATTG ATGGTGCAAG CACCTTATGG ATAATATTTA GAGTGATGGT ACCTCTCTCC AGAAGCACAC TGTCTATAGT GGGTCTTTTC ACGTTCATAG GGATCTGGGA CAACTTCCTC TGGCCTTTGA TGGTGGTGAA GGACTACAAC AAGATGCCGC TTTCCGTTTT GCTTGCCACC TTTAACCACG AATACGCAGC TTATGTGGGG CCGTTGATGG CAGGGTCCGT AATACAAACT CTTCCGATGG TTCTCATCTT TTTGATTTTC AGAAAACAAT TCCTTCAGGG AATATCTATG TCTTTCAAGT AG
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Protein sequence | MRKKMGEIIL HGVMILLALI WIYPYAWLFL SSIKPSEEIF TRFFPSRVTL EHYKYIFTMA EKMERPFLRA FFNSLFVTLT VTFSVVFTSS IIAYGLSKLR FKGSNAVFNF IIFQMLFPGF MFIIPLFVLI RKLGLYNTYS AMIVPFLMSA WSLFMLTQSY KTIPQDYIEA AKIDGASTLW IIFRVMVPLS RSTLSIVGLF TFIGIWDNFL WPLMVVKDYN KMPLSVLLAT FNHEYAAYVG PLMAGSVIQT LPMVLIFLIF RKQFLQGISM SFK
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