| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0918 |
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| Symbol | |
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| ID | 5170644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 938032 |
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| End bp | 939984 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563436 |
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| Product | putative DNA helicase |
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| Protein accession | YP_001244512 |
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| Protein GI | 148270052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTTC AGCAGTTCAT AAAGAAGCTT GTGAGGCTCG TAGAGCTCGA AAGGAACGCG
GAAATAAACG CAATGCTCGA TGAGATGAAG CGGCTCTCGG GGGAGGAAAG AGAGAAAAAG
GGTCGTACCG TTCTGGGTCT CACAGGAAAA TTTATAGGAG AAGAACTTGG ATATTTCCTT
GTGAGGTTTG GAAGAAGAAA GAAGATAGAC ACAGAAATCG GTGTGGGTGA TCTTGTTCTC
ATAAGCAAAG GAAACCCCCT CAAGAGTGAT TACACGGGAA CGGTTGTGGA GAAAGGAGAG
CGTTTCATCA CGGTAGCGGT CGATAGGCTT CCATCGTGGA AGCTCAAAAA TGTGAGGATA
GACCTCTTTG CGAGCGACAT CACGTTCAGA AGACAAATAG AGAACCTGAT GACGCTTTCT
TCGGAAGGGA AAAAAGCTCT TGAGTTTCTA CTTGGAAAGA GGAAGCCAGA AGAGTCGTTT
GAAGAAGAGT TCACTCCCTT CGATGAAGGA TTGAACGAGA GTCAGAGGGA AGCGGTTTCC
CTTGCCCTCG GAAGTTCTGA TTTCTTTCTC ATACACGGCC CCTTCGGCAC GGGAAAGACC
AGAACACTCG TGGAGTACAT AAGACAGGAA GTAGCACGTG GAAAGAAAAT TCTGGTCACA
GCGGAGAGTA ACCTTGCTGT GGACAACCTC GTGGAGAGGC TCTGGGGGAA AGTGTCTCTG
GTGAGAATTG GCCATCCTTC GCGCGTGTCC TCTCATCTGA AGGAGTCCAC ACTCGCACAT
CAAATCGAAA CAAGCAGTGA GTACGAGAAG GTAAAGAAGA TGAAGGAAGA ACTCGCAAAG
TTGATCGAAA AAAGGGACAG TTTCACAAAA CCTTCACCGC AGTGGAGAAG AGGGCTCAGC
GACAAGAAGA TCCTGGAGTA CGCGGAGAAG AACTGGAGTG CCAGGGGAGC TTCCAAGGAA
AAGATAAAGG AGATGGCAGA GTGGATAAAG TTAAACAGCC AGATTCAAGA TATCAGGGAC
CTCATAGAAC GCAAAGAGGA AATAATAGCG AGCAGGATAG TACGGGAAGC GCAGGTTGTG
CTTTCAACCA ATTCGTCCGC AGCTCTGGAA ATAATATCGG GAATAGTCTT CGATGTGGTA
GTTGTTGACG AGGCCTCTCA GGCAACTATC CCAAGCATCC TCATTCCCAT ATCGAAAGGC
AAAAAGTTCG TCCTCGCTGG GGATCACAAA CAGCTTCCAC CCACGATACT CTCAGAAGAC
GCGAAGGATC TTTCGAGAAC ACTGTTTGAA GAACTCATAA CTCGATATCC CGAGAAGTCT
TCTCTTCTCG ATACCCAGTA CAGAATGAAC GAACTTTTGA TGGAGTTTCC GAGTGAAGAA
TTTTACGACG GAAAACTGAA AGCGGCCGAG AAAGTCAGAA ACATAACGCT CTTCGACCTT
GGAGTGGAGA TACCGAACTT TGGAAAGTTC TGGGATGTTG TTCTCTCCCC AAAAAACGTT
CTGGTCTTCA TAGACACAAA GAACAGATCT GACAGATTTG AAAGGCAAAG GAAAGACTCT
CCCTCGAGAG AGAATCCATT AGAAGCACAG ATCGTGAAAG AGGTTGTGGA AAAGCTTCTC
TCCATGGGGG TGAAGGAGGA TTGGATCGGG ATCATCACTC CCTACGATGA TCAGGTGAAT
CTCATAAGAG AGTTGATCGA AGCGAAAGTA GAAGTACACA GTGTGGATGG TTTTCAGGGA
AGGGAAAAAG AGGTCATCAT CATCTCATTT GTGCGTTCGA ACAAAAACGG TGAAATAGGG
TTCCTCGAAG ATCTGAGAAG ACTCAACGTC TCACTCACAC GGGCGAAAAG AAAACTGATA
GCAACGGGAG ATTCGAGCAC GCTCTCTGTC CATCCAACTT ACAGAAGGTT CGTAGAGTTC
GTGAAAAAGA AGGGAACTTA CGTGATCTTT TGA
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| Protein sequence | MTVQQFIKKL VRLVELERNA EINAMLDEMK RLSGEEREKK GRTVLGLTGK FIGEELGYFL
VRFGRRKKID TEIGVGDLVL ISKGNPLKSD YTGTVVEKGE RFITVAVDRL PSWKLKNVRI
DLFASDITFR RQIENLMTLS SEGKKALEFL LGKRKPEESF EEEFTPFDEG LNESQREAVS
LALGSSDFFL IHGPFGTGKT RTLVEYIRQE VARGKKILVT AESNLAVDNL VERLWGKVSL
VRIGHPSRVS SHLKESTLAH QIETSSEYEK VKKMKEELAK LIEKRDSFTK PSPQWRRGLS
DKKILEYAEK NWSARGASKE KIKEMAEWIK LNSQIQDIRD LIERKEEIIA SRIVREAQVV
LSTNSSAALE IISGIVFDVV VVDEASQATI PSILIPISKG KKFVLAGDHK QLPPTILSED
AKDLSRTLFE ELITRYPEKS SLLDTQYRMN ELLMEFPSEE FYDGKLKAAE KVRNITLFDL
GVEIPNFGKF WDVVLSPKNV LVFIDTKNRS DRFERQRKDS PSRENPLEAQ IVKEVVEKLL
SMGVKEDWIG IITPYDDQVN LIRELIEAKV EVHSVDGFQG REKEVIIISF VRSNKNGEIG
FLEDLRRLNV SLTRAKRKLI ATGDSSTLSV HPTYRRFVEF VKKKGTYVIF
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