Gene Tpet_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0571 
Symbol 
ID5171021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp569952 
End bp570386 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID640563078 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001244168 
Protein GI148269708 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.93441e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTAC TCGTGGTGAA CGGACCCAAC TTGAACATGC TCGGAAAAAG AGACAAAAAC 
ATCTATGGAA ACTTTTCTCA TGAGGATCTT GTGAAGATGA TAGAAGATTG GGGAAGGAAA
AACGATGTGG AAGTGGAGGT CTTTCAGTCG AACCACGAGG GAGAAATTTT GGATAGACTG
CACAGGCTCG ATTTCGATGG TCTTGTGATA AACCCGGGGG CTTTCACCCA CTACAGCTAC
GCCATAAGGG ATGCCCTGGA GATCGTGAAG GTGCCGAAGG TGGAGGTTCA CATATCGAAC
ATACACAGGA GGGAAGAGTT CAGAAGAAGG AGCGTTACGG CTGAGGTGTG CGACGGTCAG
ATAAGCGGAC TTGGTGTGTA CGGTTACCTT CTGGCTCTGG AGTACATAAA AAAGAAACTG
GAAGAACTCA CCTGA
 
Protein sequence
MKVLVVNGPN LNMLGKRDKN IYGNFSHEDL VKMIEDWGRK NDVEVEVFQS NHEGEILDRL 
HRLDFDGLVI NPGAFTHYSY AIRDALEIVK VPKVEVHISN IHRREEFRRR SVTAEVCDGQ
ISGLGVYGYL LALEYIKKKL EELT