Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0353 |
Symbol | |
ID | 5170072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 337105 |
End bp | 337773 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640562857 |
Product | sugar fermentation stimulation protein |
Protein accession | YP_001243958 |
Protein GI | 148269498 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000202771 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGA TACTTCCAGC TGATACGGAA GGGATCTTTC TGGAAAGAAA GAGCAGATTT ACGGGAGTTG CTCTTGTCGA AGGGAAAAAG ACCCTGATAC ACATCCACAA TACAGGGCGC CTTCCGCTTT TGAAAAAAGG AAAAAGAGTT CTCCTGAAGC GTGCAGAATC CGATCGAAGG AAGACCGGCT GGGACCTTCT GGCAGTCGAA CACAGAGATG AATTCGTCTT TGTCCATTCG GGTTTCCACA GTATCGTGGC CGGGAAGATT CTGGAAGAAC TGTTCCCAGG CTCCACGATA GAAAGCGAGA AACGCTTTGA AAACAGCAGG TTCGATTTCC TGATCGACAG GAGGACCTTT GTGGAAGTGA AGGGATGTAC GTACGAAGAA GATGGTGTCG CGATGTTTCC AGACGCACCC ACAGAACGTG GAAGAAGACA CATCGAGGAG CTGATCAGTT CTGTGAAAAG CGGTTTCAAG GCTCTTCTGC TGATCCTGGT TTTCCTCGAA AGCGACTGTT TTCTTCCGAA CAGAAACGTT GACCCGGCTT TTTCAAGAGT TTTCTGGCGC GCTCTGAAAA GCGGTGTGAA TATCGACGTG TTCAGGGTAA AATACGATGG AGAGTACCTG TGTTCAACAG AGAAGCTGTC GATCTGTGAG GAGGTGTAG
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Protein sequence | MRLILPADTE GIFLERKSRF TGVALVEGKK TLIHIHNTGR LPLLKKGKRV LLKRAESDRR KTGWDLLAVE HRDEFVFVHS GFHSIVAGKI LEELFPGSTI ESEKRFENSR FDFLIDRRTF VEVKGCTYEE DGVAMFPDAP TERGRRHIEE LISSVKSGFK ALLLILVFLE SDCFLPNRNV DPAFSRVFWR ALKSGVNIDV FRVKYDGEYL CSTEKLSICE EV
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