| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0097 |
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| Symbol | |
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| ID | 5171219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 89332 |
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| End bp | 90636 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562596 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001243702 |
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| Protein GI | 148269242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.698002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTG TCAGGATAGA GACTTTCGGC TGTAAGGTGA ATCAGTACGA AAGTGAATAC
ATGGCTGAAC AGTTAGAAAA AGCCGGGTAC GTGGTTTTAC CCGACGGGGA TGTTTCTTAC
TATATAGTGA ACTCGTGTGC CGTTACCAAG GAAGTTGAGA AGAAAGTGAA GAGATTGATA
AAGAGCATCA GAAACAGGAA CAGGAACGCA AAAATCATCC TCACCGGTTG TTTTGCCCAG
CTTTCTCCGG ATGAGGCAAG GAATCTTTCG GTGGACATGG TTCTGGGAAT CGATGAGAAA
AAACACATAG TGGATCATAT TAACTCCCTG AACGGAAAAC AACAGGTTAT TGTATCTGAA
CCCGGCCGGC CCGTTTACGA GAAAGTAAAG GGGAGTTTTG AAGACAGAAC CCGTTCTTAC
ATAAAGGTTG AAGACGGGTG TGACAACACC TGTACCTACT GTGCTATCAG GTTGGCCCGT
GGCAGTAAGA TCAGAAGTAA ACCGCTCGAA ATATTCAAAG ATGAATTTGT CGAAATGGTG
GCAAAGGGTT ACAAAGAGAT CGTAATAACC GGTGTCAACC TTGGAAAATA TGGAAAGGAC
ATGGGTTCTT CTCTTGCTGA ACTTCTGAAG GTCATCGAGA AAGTTCCTGG GGATTATCGA
GTGCGTCTCA GCTCCATAAA TGTGGAAGAT GTGAACGACG AAATTGTGGA GGCTTTCAAG
AGAAATCCCA GATTGTGTCC GCATCTTCAC ATTTCAGTTC AGAGCGGATC CGATGATGTG
TTGAAAAGAA TGGGAAGAAA ATACAGAATC TCTGATTTCA TGCGTGTTGT TGACAAATTG
AGAAGTATCG ATCCAGATTT TTCGATAACA ACGGACATAA TCGTTGGTTT TCCAGGAGAA
ACGGACGACG ATTTCCAGAA AACTCTTGAT CTGGTTGAAA AAGTGGGGTT CAGTAGAGTG
CATATCTTCA GATTTTCACC GCGCCCCGGA ACTCCAGCGA GTAGAATGGG AGGAAGTGTT
CCCGAATCGA AGAAAAAAGA GCGTCTGGAT GTTTTAAAAG AGAAAGCGAA AGATGTTTCT
ATCAGGTACA GGAAGAGAAT CATTGGGAAA GAAAGAAAAG TTCTCGCCGA ATGGTACGTC
ATGAAGGGTA TCCTTTCTGG TTATGACGAA TATTACGTGA AGCATGAGTT TGTGGGAGAT
CGAGTGGGGG AATTCCATAA TGTAAGGGTG AAATCCCTTT CGGAAGAGGG AGTGATTTCC
TGTCGTGTTG ATATGGTGGA GGGGAAAGTT TCAGCGCGCG GATGA
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| Protein sequence | MKTVRIETFG CKVNQYESEY MAEQLEKAGY VVLPDGDVSY YIVNSCAVTK EVEKKVKRLI
KSIRNRNRNA KIILTGCFAQ LSPDEARNLS VDMVLGIDEK KHIVDHINSL NGKQQVIVSE
PGRPVYEKVK GSFEDRTRSY IKVEDGCDNT CTYCAIRLAR GSKIRSKPLE IFKDEFVEMV
AKGYKEIVIT GVNLGKYGKD MGSSLAELLK VIEKVPGDYR VRLSSINVED VNDEIVEAFK
RNPRLCPHLH ISVQSGSDDV LKRMGRKYRI SDFMRVVDKL RSIDPDFSIT TDIIVGFPGE
TDDDFQKTLD LVEKVGFSRV HIFRFSPRPG TPASRMGGSV PESKKKERLD VLKEKAKDVS
IRYRKRIIGK ERKVLAEWYV MKGILSGYDE YYVKHEFVGD RVGEFHNVRV KSLSEEGVIS
CRVDMVEGKV SARG
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