| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7248 |
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| Symbol | ssuB |
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| ID | 5149367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7615903 |
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| End bp | 7616571 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561920 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_001243031 |
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| Protein GI | 148258446 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00375076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.359257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGACGCT CCGGCTGCGG AAAATCGACC CTGCTGCGTC TGGTTGCGGG GCTCGAAGCG
CCGAGCGGCG GCGGCATCGC CGTTCATGGG TCTCCGGTCT CGCGGCCGCC CGACAGTGTG
CGGTATCTGT TCCAGAACTA CGGGGAGTCG CTGCTTCCGT GGCGTACAGT CGGTGGAAAC
ATTCAGTTCG GATTGCGACA CGCCTATCGC CGGTCGATAC TGACGGACCG CGCGGGAATC
CGCGCGGTCA TCGACGAGAA GCTGGCCGAG GTCGGTCTTG CGGGGACCGC CGACCGATAT
CCGTCGGAGC TGTCGGGCGG AATGCAGCAG CGCGTGGCAA TCGCCCGCGC GCTGGCCTCC
GAACCGCAGA TCCTGTTACT CGACGAGCCG TTCTCGGCGG TGGATGCGCT GAGCCGAGCC
AATCTTCAGG ACCTTCTGCT TCGCATCTGG CAGTCTCATG CGCTGACGAT CGTCTTCGTC
ACCCATGACA TCGACGAAGC ACTGTATCTG TCCGACCGCG TCCTGGTTCT CGAACCGAAT
GGCGGCGGGC TCCAGATGGA CGTCGACGTG CCGCTGCCGC GTCCACGGCA CCAGATCGAA
ACGCGTCGCG CTCCCGCATT CGTGGAAATG AGAAGCGACA TCCTTAAGCG CGTCCTCGCG
CCGAACTGA
|
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| Protein sequence | MGRSGCGKST LLRLVAGLEA PSGGGIAVHG SPVSRPPDSV RYLFQNYGES LLPWRTVGGN
IQFGLRHAYR RSILTDRAGI RAVIDEKLAE VGLAGTADRY PSELSGGMQQ RVAIARALAS
EPQILLLDEP FSAVDALSRA NLQDLLLRIW QSHALTIVFV THDIDEALYL SDRVLVLEPN
GGGLQMDVDV PLPRPRHQIE TRRAPAFVEM RSDILKRVLA PN
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