| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4236 |
|---|
| Symbol | |
|---|
| ID | 5149102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4450451 |
|---|
| End bp | 4451344 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640559060 |
|---|
| Product | putative transport protein |
|---|
| Protein accession | YP_001240197 |
|---|
| Protein GI | 148255612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.172586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.870652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CGCCGAAGGC CAGCGGGCGG ATCACGCCCG CCGGGCTGAT GTTTCTTGCC
GTGACCTCGC TCGGCTGGGG CTTCAACTGG CCCGTCACCA AGCATCTGGT CGGCGTGCTG
CCACCGCTGA CGCTGCGCGG CAGCACCGGC GTGGTCGGCG CGGCGCTGCT GGCGCTGCTC
GCGATCCTCA GGAGCCAGAG CTTGGCCGTG CCGCGCGAGG TCTGGCCGCG GCTGATCATC
GCCGGGCTGC TCAATGTCAC GGTGTGGATG GTGCTGATGG GGCTGGCGCT GCTGTGGCTG
CCGGCCGGCG AGGCGGCGCT GATCGCCTAT ACGATGCCGG TCTGGGCGTC GATCCTGGCC
TGGCCGATCC TCGGCGAGCG GCCGACCTGG CTGCGCGTGC TCGCGCTGCT GCTGGCCTTC
GCCGGGCTCG CCGCGCTGAT GGGCGGCAAC GGCCTGGCGG CCAGCCGCGA CAAACTGCCG
GGCATCCTGA TGGTGCTCGG CGGCGCCTTC GGCTTCGCGC TCGGCGCGGT GCTGGCGAAG
AAGCTGCCGA TCCGGCTGCC GCCGCTGTCG GCGGCGGCCT GGCAGATCGG CATCGGCTGC
GTGCCGATCG TGCTGGTGGG CGTCGTCATC GAACAGTCCG ACTGGAGCAG GCTCGACCAG
CTCGACTGGG CGCTGATGTT CTACTCGACG GTGATCCAGT TCTGCGTCGC CTATGTCACA
TGGTTCGCGG CGCTGGCGCG GCTGCCGGCC TCGGTGGCGG CGATCGGCAC CATGGCCGTC
CCGGTGATCG GCGTGGTCGC CTCGGCGATC GCGCTCCGCG AGCCGCTGGG GGCCGGGCAG
CTGGCCGCGC TGGCGCTCAC GCTGGCCGCA GTGGCGCTGG CGACGCGGGG CTGA
|
|---|
| Protein sequence | MTDTPKASGR ITPAGLMFLA VTSLGWGFNW PVTKHLVGVL PPLTLRGSTG VVGAALLALL
AILRSQSLAV PREVWPRLII AGLLNVTVWM VLMGLALLWL PAGEAALIAY TMPVWASILA
WPILGERPTW LRVLALLLAF AGLAALMGGN GLAASRDKLP GILMVLGGAF GFALGAVLAK
KLPIRLPPLS AAAWQIGIGC VPIVLVGVVI EQSDWSRLDQ LDWALMFYST VIQFCVAYVT
WFAALARLPA SVAAIGTMAV PVIGVVASAI ALREPLGAGQ LAALALTLAA VALATRG
|
|---|
| |