Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2849 |
Symbol | yliC |
ID | 5150624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2954138 |
End bp | 2955079 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557729 |
Product | ABC transporter permease protein |
Protein accession | YP_001238883 |
Protein GI | 148254298 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.585703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.643564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCT TCCTCGCCCG CCGCCTCGCC CAGATCATCC CGACGCTGAT CTTCGTCTCG ATCCTGATTT TCTCGCTGCA GCAATTGCTG CCCGGCGATC CTGCCCTCGT GATGGCCGGC GAGGAGCGCG ATCCGGCTGT GATCGAGCAG ATCCGCAAGC AATATCGCCT GGATCAGCCG CTGCCCGTCC AATATGGCTA CTGGATCAAG GGCGTGCTCT CAGGCGATTT CGGCGAGTCG CTGCGCATCA AGATGCCGGT GCGCGACCTC ATCCTGCAGA AGCTGCCGGT GACGCTGCAG CTCGCATCGA TGGCGATCGT GATCGCGTTC CTGATCGGCA TTCCTGCCGG CATCATCTCC GCGGTAAAGC GCGGGACCGC GTGGGACTAT GCCGCCAACC TGTTTGCGCT GTGGGGCATC TCGACGCCGA ATTTCTGGCT CGGCATCATG CTGATCTTCG TGTTCTCGAT CCAGCTCGGC TGGCTGCCCG CCTCCGGCTA TGTCCCGCTG GCCGAGGACT GGCGCGCCAG CCTCGCCGCC ACCATCATGC CAGCCTTCGT GCTCGGCAAT GCCATCGCCG CGATCCTGAT GCGTCACACC CGCAGCGCGA TGCTGCAGGT CCTGGGCAGC GACTACATCC GCACCGCGCG CGCCAAGGGC ATCTCCGAGC GCCAGGTCAT CCTGCGTCAC GCGCTGCGCA ATGCCTTGAC GCCGGTGATC ACGCTGGGGG CGCTCGAGCT CGGCACGCTG CTGTCCGGCG CCGTGCTGAC CGAACAGATC TTCTCGATCC CCGGCTTCGG CAAGCTGATC GTCGATGCCG TGTTCAATCG CGACTACGCC GTCGTGCAGG GCGTCGTGCT GGTCACCGCC ACCGTCTACA TCATGCTGAA CCTGATTGCC GATCTCGCCT ACGTCCTCGT CAACCCGCGG CTGAGGAGCT GA
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Protein sequence | MLTFLARRLA QIIPTLIFVS ILIFSLQQLL PGDPALVMAG EERDPAVIEQ IRKQYRLDQP LPVQYGYWIK GVLSGDFGES LRIKMPVRDL ILQKLPVTLQ LASMAIVIAF LIGIPAGIIS AVKRGTAWDY AANLFALWGI STPNFWLGIM LIFVFSIQLG WLPASGYVPL AEDWRASLAA TIMPAFVLGN AIAAILMRHT RSAMLQVLGS DYIRTARAKG ISERQVILRH ALRNALTPVI TLGALELGTL LSGAVLTEQI FSIPGFGKLI VDAVFNRDYA VVQGVVLVTA TVYIMLNLIA DLAYVLVNPR LRS
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