Gene BBta_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2849 
SymbolyliC 
ID5150624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2954138 
End bp2955079 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID640557729 
ProductABC transporter permease protein 
Protein accessionYP_001238883 
Protein GI148254298 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.585703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.643564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCT TCCTCGCCCG CCGCCTCGCC CAGATCATCC CGACGCTGAT CTTCGTCTCG 
ATCCTGATTT TCTCGCTGCA GCAATTGCTG CCCGGCGATC CTGCCCTCGT GATGGCCGGC
GAGGAGCGCG ATCCGGCTGT GATCGAGCAG ATCCGCAAGC AATATCGCCT GGATCAGCCG
CTGCCCGTCC AATATGGCTA CTGGATCAAG GGCGTGCTCT CAGGCGATTT CGGCGAGTCG
CTGCGCATCA AGATGCCGGT GCGCGACCTC ATCCTGCAGA AGCTGCCGGT GACGCTGCAG
CTCGCATCGA TGGCGATCGT GATCGCGTTC CTGATCGGCA TTCCTGCCGG CATCATCTCC
GCGGTAAAGC GCGGGACCGC GTGGGACTAT GCCGCCAACC TGTTTGCGCT GTGGGGCATC
TCGACGCCGA ATTTCTGGCT CGGCATCATG CTGATCTTCG TGTTCTCGAT CCAGCTCGGC
TGGCTGCCCG CCTCCGGCTA TGTCCCGCTG GCCGAGGACT GGCGCGCCAG CCTCGCCGCC
ACCATCATGC CAGCCTTCGT GCTCGGCAAT GCCATCGCCG CGATCCTGAT GCGTCACACC
CGCAGCGCGA TGCTGCAGGT CCTGGGCAGC GACTACATCC GCACCGCGCG CGCCAAGGGC
ATCTCCGAGC GCCAGGTCAT CCTGCGTCAC GCGCTGCGCA ATGCCTTGAC GCCGGTGATC
ACGCTGGGGG CGCTCGAGCT CGGCACGCTG CTGTCCGGCG CCGTGCTGAC CGAACAGATC
TTCTCGATCC CCGGCTTCGG CAAGCTGATC GTCGATGCCG TGTTCAATCG CGACTACGCC
GTCGTGCAGG GCGTCGTGCT GGTCACCGCC ACCGTCTACA TCATGCTGAA CCTGATTGCC
GATCTCGCCT ACGTCCTCGT CAACCCGCGG CTGAGGAGCT GA
 
Protein sequence
MLTFLARRLA QIIPTLIFVS ILIFSLQQLL PGDPALVMAG EERDPAVIEQ IRKQYRLDQP 
LPVQYGYWIK GVLSGDFGES LRIKMPVRDL ILQKLPVTLQ LASMAIVIAF LIGIPAGIIS
AVKRGTAWDY AANLFALWGI STPNFWLGIM LIFVFSIQLG WLPASGYVPL AEDWRASLAA
TIMPAFVLGN AIAAILMRHT RSAMLQVLGS DYIRTARAKG ISERQVILRH ALRNALTPVI
TLGALELGTL LSGAVLTEQI FSIPGFGKLI VDAVFNRDYA VVQGVVLVTA TVYIMLNLIA
DLAYVLVNPR LRS