Gene BBta_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2466 
Symbol 
ID5151842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2553321 
End bp2554091 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID640557382 
Producthypothetical protein 
Protein accessionYP_001238537 
Protein GI148253952 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGACGATTCC CGTCACCGAG GACGAACTGC ACGCCTATGT CGACGATGAG 
CTGCCGGCCG AACGCCGCGG CGATGTCGAG AGCTGGCTGG CGGCTCACCC GGCCGATGCC
GAGCGCGTGG CCGCCTGGCG CCGGATGGCC GAGGCGCTGC ACGCCCGCTA CGACGCGGTG
GCGAACGAGC CGGTGCCGCC GCGCCTCGAT CTGGAGCTGC TGGATCGCAA GCCGCGGCGC
TGGATCCTCG GCGCGGCCGC GGCCAGCCTC GCCGCTTTCC TGGCCGGCGG CGCGGCCGGC
TGGGTCGCGC ATGGCGCCGC GTCGCCGCCG GCTCTGTTGC AGAATGTGAC CGGAGAGGCG
CTCGACGCGC ATCGGCTCTA CGTCGTCGAC GTCCGCCATC CGGTCGAGGT CCCCGGGGAC
GAGAAGGCCC ATCTGCAGCA ATGGCTGACG CGGCGCTGTG GCCGGACCGT GCAGGCACCG
GAGCTGGAGG CCACGGGACT CAAGCTGGTG GGCGGACGGC TGCTGCCCGG CCCGACCGGC
CCGGCCTCGT TCCTGATGTA TGAGAGCGCG TCGGGCGAGC GCTTCACCGT CTACGCCACC
AAGACCGCGA TCGAAGCGGC GCAGATGCGC TATACGACCC AGGACAATGC CGCGGCGCTG
TCCTGGGCGG AGCGCGGCGT CGGCTATGTC GTCACCGGAG GAACTGACCG CACCCGTCTC
ACCCAGGTTG CGCGCCTTGT TTATGACCAG GCTGAACGGT CGGGCGGATA G
 
Protein sequence
MTDPTIPVTE DELHAYVDDE LPAERRGDVE SWLAAHPADA ERVAAWRRMA EALHARYDAV 
ANEPVPPRLD LELLDRKPRR WILGAAAASL AAFLAGGAAG WVAHGAASPP ALLQNVTGEA
LDAHRLYVVD VRHPVEVPGD EKAHLQQWLT RRCGRTVQAP ELEATGLKLV GGRLLPGPTG
PASFLMYESA SGERFTVYAT KTAIEAAQMR YTTQDNAAAL SWAERGVGYV VTGGTDRTRL
TQVARLVYDQ AERSGG