| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1880 |
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| Symbol | |
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| ID | 5149836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1947512 |
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| End bp | 1949140 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640556830 |
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| Product | putative flagellar hook length determination protein |
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| Protein accession | YP_001237987 |
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| Protein GI | 148253402 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGAGTT TCATTGCGAG AGGTTCCAAG GTGTTCAGCG TTCCGTCAGA CATCCCGGCC
AGTACGACCG TCAGGACCGC CGTTGCCAAG ACGTCCCGCT CGGACGCCTC GCAGCCGTCC
GACAGCTTCG CCGCGCTGGT CGAGGCCGCG GCCGCGCCGG ACACGTCCAC ATCTCCCCTG
CCCGGCGGGT CGTCGTCTCC AGCGCCGCGC AGCAGCGCGT CCAGCCCGAG CCGCGAGTCT
GCACGCACCG ACTCCGACCG CGCGGCCCAG GCGAAGTCCC CTGACAAGAG CGACGGCAGC
TCGTCGCGTC CCGACCGCAG CGACAAATCG TCATCCGATC AGACATCCGA CCCCGTCAGC
GACAAGAGCG CCACAACTGG CACGGCTGAC GCCACCGACG GCAAATCCAC CGACAAAGCC
GACAAGAAGG ACGGCGACCC GGCTACGGCG GATACGACCA AGGCGGCCGA CGCAACCGCC
AGCGCTCAGG CGACTGCAGC GCCGACTCCG GTCGCCGTTG CGCTTCCGTC CGAGATCATC
TTGACTAACG TCGTCAGCGG CGCGGCTGCG ACGAACAATG ACGGGTCTTC CACCACGCCG
GCGGCCTCTG TGCCGGCTGG TCCGAGCGGC GTCGGTCCGC AGGGTGCGGT CGATGCCACC
GCCGGACTCG CAGCCGCCGC AGCCAAGTCG GCCGGTGCGA CCAAGACGTC CGAGAACACC
ACCGCGGCGA CCGCGGGCTC CGGCCCGGCC ACGACGCCCT CCGGCGACGC GGCGGCCTCC
GCGGACCAGA GCTTCACCGC CGCCCTCGAT GCATCGGCGG CCGGCGACGC CAAGACAACC
GGCAAGCCGG CTGCGCAAAC CAAGACCGGC CTCGTGAACG GCGACGCCGG GAAGGTCACC
GAGCAAGGCA ACGGCCCTGT CCAGGGGGCT CAGCAACCGA CTCACGGCCT GACGCAACAG
CCCGCGGTCG GAGCGAAGCC GGAAACGGTC CCATCAGACG ACACCGGCAA GGCCAGCGGC
AATACCCAGC CGCCGTCCGG ACACGATCGG AATGGTGCGC AAGCGGCCAA TCAGGCGAAC
GCCCCGGCTT CCGATCCGAC GGCGCAGCTG GCGACCGCGT TGCAGCCGCA GCTCACGACT
CCGACCTCAC AGTCAGGCCA GATCACGTCA GCCAATCTGA CCGCGACGGC CGCCACGGCT
ACAGCCGTGC CGCTGCATGG GCTCGCGGTC GAGATCGCCG CGTCCGCGCT GAATGGCAAG
AGCCGCTTCG AGATCCGACT GGACCCCGCC GAACTCGGAC GCATTGATGT GCGCATCGAC
GTCGATCGTA ACGGTCAGGT CACCTCGCAT CTGCGGGTCG AGAAGCCGGA GACGCTCGCG
ATGCTGCAGC AGACCGCGCC GCAACTGCAG CAGGCGCTGC AGGACGCCGG CCTCAAGAGC
AACAATAGCG GGCTGCAATT CTCGCTCCGC GACCAGAATT CGTCCGGCCA GAACGGCGGC
GACAACCAGC AGAACGGCAA CGCGCAACGC CTGATCGTGA CCGAGGACGA AACGGTTCCA
GCCCAGCTGG CCGGACGGTC CTATGGACGC ATGTTCAGCG CGCAGGGCGG CGTCGATATC
CGCGTTTAA
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| Protein sequence | MSSFIARGSK VFSVPSDIPA STTVRTAVAK TSRSDASQPS DSFAALVEAA AAPDTSTSPL
PGGSSSPAPR SSASSPSRES ARTDSDRAAQ AKSPDKSDGS SSRPDRSDKS SSDQTSDPVS
DKSATTGTAD ATDGKSTDKA DKKDGDPATA DTTKAADATA SAQATAAPTP VAVALPSEII
LTNVVSGAAA TNNDGSSTTP AASVPAGPSG VGPQGAVDAT AGLAAAAAKS AGATKTSENT
TAATAGSGPA TTPSGDAAAS ADQSFTAALD ASAAGDAKTT GKPAAQTKTG LVNGDAGKVT
EQGNGPVQGA QQPTHGLTQQ PAVGAKPETV PSDDTGKASG NTQPPSGHDR NGAQAANQAN
APASDPTAQL ATALQPQLTT PTSQSGQITS ANLTATAATA TAVPLHGLAV EIAASALNGK
SRFEIRLDPA ELGRIDVRID VDRNGQVTSH LRVEKPETLA MLQQTAPQLQ QALQDAGLKS
NNSGLQFSLR DQNSSGQNGG DNQQNGNAQR LIVTEDETVP AQLAGRSYGR MFSAQGGVDI
RV
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