Gene BBta_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0424 
Symbol 
ID5155129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp427587 
End bp428504 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID640555442 
ProductDMT family permease 
Protein accessionYP_001236616 
Protein GI148252031 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC TGTCCCGAAT CTCTACCGCA AACGATGAGC GCTCGGCGCG GCTGGCCGGC 
ATCGGCTTGA TGCTGCTGTC GATCGCGATG TTCTCGTTCG GCGATGCGCT GGGCAAGTTC
CTGGTGTCGA CCTATGCCGT CGGCCAATTG CTGTGGCTGC GCGCCTGCGC GGCGCTGCTG
CTGCTCGCGC CGTTCATCTG GCGCAACCGC GCCGCGTTCC TGCAGCTCGA GCGGCCGTGG
CTGCAGCTGG TGCGGGTGAT CCTCTCGACG CTCGAGGTCG CCGCGTTCTT TCTCGCCACC
GTCTATCTGC CGCTCGCCGA TGTGATCACC TATTATCTCG CCGGGCCGAT CTTCGTCACT
GCGCTGTCGG CGCTGGTCTT GCGCGAGCAT GTCGGCTGGC GGCGCTGGAC AGCGATCCTG
ATCGGCTTCT GCGGCGTCTT GATCGCGCTC AGGCCCTCGG CGCAGACATT CAGCCTGCCG
GCGCTGATCG CGCTCGGCGG CAGCCTGTCC TTCGCGGTGC TGATGCTGAT CACCCGCTCG
CTGCGATCGA CGCCCGACAT CGTGATGGCG TCCTCGCAAT TCGTCGGCAC CTTCCTGCTC
GGTGCGGCGA TGTCCTCGTT CGGCTGGGTG ACGCCGACAC CCGGCAGCCT GCTCCTGTTC
GCCGCCGCCG GCATCATCTC GGTGACGGCA CTGTTCTGCG TCAACCGCTC GCTCAAGCTG
GCGCCGGCCT CGGTGGTCGT GCCCTATCAA TATACGATGA TCGTCTGGGC TGTGCTGTTC
GGCTTCGTCG TGTTCGGCGA TGTCCCGCAT CCCGCGACCA TCATCGGTGC GTCCATCATC
ATCGGCGCCG GGTTGTACAT CTACCTGCGC GAACGCAGCC TGGGGCAGGG CACGGGTGCG
GTGAACCCGC CGGCTTGA
 
Protein sequence
MSVLSRISTA NDERSARLAG IGLMLLSIAM FSFGDALGKF LVSTYAVGQL LWLRACAALL 
LLAPFIWRNR AAFLQLERPW LQLVRVILST LEVAAFFLAT VYLPLADVIT YYLAGPIFVT
ALSALVLREH VGWRRWTAIL IGFCGVLIAL RPSAQTFSLP ALIALGGSLS FAVLMLITRS
LRSTPDIVMA SSQFVGTFLL GAAMSSFGWV TPTPGSLLLF AAAGIISVTA LFCVNRSLKL
APASVVVPYQ YTMIVWAVLF GFVVFGDVPH PATIIGASII IGAGLYIYLR ERSLGQGTGA
VNPPA