| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3789 |
|---|
| Symbol | |
|---|
| ID | 5166111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4428326 |
|---|
| End bp | 4429411 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640551272 |
|---|
| Product | CDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_001232513 |
|---|
| Protein GI | 148265807 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA TGGAGTTCTG GAAAGGCAAA AAAATCTTCC TCACCGGCCA TACAGGTTTC
AAGGGTTCGT GGCTTTCTTT GTGGCTCCAT TCCCTCGGGG CAGAGGTGAC TGGCTATGCG
CTGGCGCCGC CGACGGAGCC GAGCCTGTTT GAGTTGTGCG GCATCAACGA TCTTGTTGCC
TCGACCATTG CCGATGTGCG GGACGGTGAC CGGCTGAAGT CGGAGATGGT CAAGGCCTCT
CCCGATATCG TCATCCACAT GGCGGCCCAA CCTCTTGTGC GGGACTCGTA CAAAATCCCG
GTGGAGACCT ACGCCGTCAA CGTCATGGGG ACCGTTCACC TGCTGGAAGC GGTGCGCAGC
TGCCCCCGCG TAAAGGCGGT GGTCAACGTG ACCACCGACA AGTGCTACGA AAACCGTGAA
TGGATCTGGG GGTACCGGGA AAACGAGCCG ATGGGGGGGT ATGACCCCTA CTCCAACAGC
AAGGGGTGTT CGGAGTTGGT GACAGCCGCC TATCGCTCGT CGTATTTTGT CAATCAACAA
CTCAACAGTT CAGCCACTCA ACGCCACGGC GCAGCCGTGG CAACTGCCCG GGCCGGCAAT
GTCATCGGCG GCGGCGACTG GGCAGTTGAC CGGCTCATTC CAGACTGCGT CAAGTCGCTG
TTGAGTGGCG AAAAGATTCT GATCAGGAAT CCGCACGCCA TCCGCCCCTG GCAGCATGTC
CTTGAACCCC TTTCCGGCTA CCTGCTCCTG GCGCAGCGGC TCTATGAGGA AGGTCCTGCT
TTTGCTTCCG GGTGGAACTT CGGCCCCCAT GACGAAGACG CCAGGCCTGT TGAGTGGATT
GTGGAGAGGC TCTGCGCCCG GTGGGGTGAA GGCGCAGCAT ATGAGCTGGA CATGGGCGAC
CATCCCCACG AGGCCCACTT CCTGAAGCTC GACTGCTCCA AGGCAAGGGC TGAACTGGGG
TGGCGGCAGC GATGGGGCCT TGAGCGGTCG CTGGACAGCA TCGTTGAGTG GACGGAGGCC
TATCGGGAAA AACGGGACCT GCGGGAGGCC TGTCTCAAGC AGATGGAGGA ATACCTGACG
GTATAG
|
|---|
| Protein sequence | MNDMEFWKGK KIFLTGHTGF KGSWLSLWLH SLGAEVTGYA LAPPTEPSLF ELCGINDLVA
STIADVRDGD RLKSEMVKAS PDIVIHMAAQ PLVRDSYKIP VETYAVNVMG TVHLLEAVRS
CPRVKAVVNV TTDKCYENRE WIWGYRENEP MGGYDPYSNS KGCSELVTAA YRSSYFVNQQ
LNSSATQRHG AAVATARAGN VIGGGDWAVD RLIPDCVKSL LSGEKILIRN PHAIRPWQHV
LEPLSGYLLL AQRLYEEGPA FASGWNFGPH DEDARPVEWI VERLCARWGE GAAYELDMGD
HPHEAHFLKL DCSKARAELG WRQRWGLERS LDSIVEWTEA YREKRDLREA CLKQMEEYLT
V
|
|---|
| |