Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2683 |
Symbol | |
ID | 5137609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2840525 |
End bp | 2840758 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534131 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_001218561 |
Protein GI | 147675272 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000806139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCCA TAGAAAAACT CACCCAACCT AACCAACTCT CTTGTGACCG ATTTGTCCGA GAAGCAGAAC GTCGCCGTAT CACCGCCATT TCACGCAGCC AAGCTTGGAA GCTTGAAAAA GAAGGTCGCT TCCCTCCTCG TATCAAGTTA GGTAGCCGTT CCGTCGTTTG GCGACTTTCT GACCTTACAC AGTGGCTAGA CAAACAAGCA GGCCAATATT CGGAAGAAGC ATAA
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Protein sequence | MTAIEKLTQP NQLSCDRFVR EAERRRITAI SRSQAWKLEK EGRFPPRIKL GSRSVVWRLS DLTQWLDKQA GQYSEEA
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