Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2480 |
Symbol | |
ID | 5136436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2631558 |
End bp | 2632400 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533931 |
Product | SpoOM-related protein |
Protein accession | YP_001218373 |
Protein GI | 147674742 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACAAG GGTTAGCCCT TACTATGCAA TTCTCACAAC AGGAGGTGTC TATGTCGTTT ATCAAGAAAA CCCTCGCCAG TTTTGGGATT GGCTCTGCGA AAGTCGATTC GGTGTTGCAG CAGGAAGTGC TCTATCCCGG CCAATCCGTT AAGGTCATCA TCCATGTTTA TGGCGGTGCA ACAGCGCAAG TCATTGATAA CATCGAGCTC AAACTTTGTT GCTGTTATAT TGCAGAAGTG GCGGATGAGC GCGGTCAGCA ACAAGGCCAG CCAATGCGCC GAGTTCCTCA TACCTACACC TTAGCCAACT GGTCTTTACC GTACGCCTTT ACGATTGAGG CGGGTGAAAC GCGTAATTTT GATATCGAAC TCAGCATCCC TTGGAATACC CCAGTGACGA TAGGGGATGC CAAAGTTTGG TTAGAGACTG GACTCGATAT TGCGTTAGCG CTGGATCCTA CCGATAAGGA CATTCTCACC GTGCGCCCTG AGCCGATGAT GGATGGTATT TTTAGTGCGC TGGAAGCACA AGGTTTGCGT TTACGTCAGG TTGAGTGTGA GCAAGCCAAA GGCTTCGCAC TGCCTTTTGT GCAAGAGTTC GAATTTGTCC CTACCACGGG GCCATTTCAA GGTCGCTGGC GTGAAGTTGA AATCGTGGCT TATCGTGATC CTGAAGCCTT ACAGCTCTGG TTTGAAGTCG ATCGTTATCA ACGAGGCGCA TCCGGCATGT TGGCCAGCTT GCTAGGGCGC GGTGAGCTCA AGCGACATCT CACTTTACCT GCGCGCACAT CACCACAGGA AGCCGGGGAG CAAGTGTTGG CGTTTCTTGA TCGCAGCTGC TGA
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Protein sequence | MRQGLALTMQ FSQQEVSMSF IKKTLASFGI GSAKVDSVLQ QEVLYPGQSV KVIIHVYGGA TAQVIDNIEL KLCCCYIAEV ADERGQQQGQ PMRRVPHTYT LANWSLPYAF TIEAGETRNF DIELSIPWNT PVTIGDAKVW LETGLDIALA LDPTDKDILT VRPEPMMDGI FSALEAQGLR LRQVECEQAK GFALPFVQEF EFVPTTGPFQ GRWREVEIVA YRDPEALQLW FEVDRYQRGA SGMLASLLGR GELKRHLTLP ARTSPQEAGE QVLAFLDRSC
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