Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2078 |
Symbol | |
ID | 5135984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2235096 |
End bp | 2236349 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640533534 |
Product | hypothetical protein |
Protein accession | YP_001217995 |
Protein GI | 147675731 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000117952 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAGCA TTAAAATCAC GGTAGATAGA TTGCAACCCG GGCTCTACAT TCGGTTGCCT GTCAAATGGA ATGAACATCC CTTCCTATTC AATAGCTTTA AGATCAAATC ACAAGAGCAG ATCCAACTGA TCAAGCATCT TGGTATTCAG CACGTTTTTC TCAATCCGGG ATTAAGCGAT AGCCAGCCTT TACCGCCAAG CGTTGAAGAG GCAACTCCAG AAGAGGCTCT ACCTCCGGTT GATAGTGAAG CGGAAAAGCT ATGGCAGGAA AAGCAAACAC GAATAGAGAA GCTCAACGAA TATCGACGTC GAGTACAAAC TTGTGAGAAA GAGTTTGAAC GTTCTCTTGC TCGTATGCGT GCGGTAGTGA ATAAAATTCG TAACCGCCCT TTAGATGCCG TCGGCGAAGC CATCATATTG GTCGATGATA TCGTCGACAA ATTGCTGAGT GATGATAATG TCACCTTGCA TTTAATGAAC AGCAAAAGTG AATTTGAAGA TATCTATTTT CACTCTTTAA ACGTGTCAGT CATTGCCATG ATGATTGGTA AAGCGAGAGG CTTGCCTGCA GAAAGAATCA AAGAGTTGGC TTTTGCGGCG CTATTTCATG ACATAGGCAA AGTGAGAGTG CCAACGGCGA TCGTACGTAA AAAGACCCCA TTAACGGAAC CGGAAGAAAA CTACTTACGG CTGCATACCA AATACGGCAT AGAGTTGGCC GATAATATAG AAACGTTTCC TGAAAGTGCT AAACGCGTCA TCGAACAACA TCACGAACTG CGAGATGGTT CAGGCTATCC ACTCGGCCTA AAAGGGGATG ATATTGATGA GCTTGCGCAG ATTGTGGCGG TAGCGAACGC GTTCGACAAT CTTTGCCACC CCAATATTCC TTCGGAACAA AAGATCCCGT ACGTTGCTTT GTCTCATCTA TTTAAGAATT GTAAGCATCT TTATAACGCG GAGAATTTAG GCATCTTAGT TAAGTTCATG GGGGTGTTCC CACCAGGAAC TGTCGTACAG CTCTCTAATG ATATGGTGGG GTTAGTCATT TCAGTGAATG CAAGTAGCCT CTTGTATCCG AATGTACTGA TTTATGATCC CTCAGTCCCG CGTTCTCAAG CGACGATAAT TGATCTTGCA GACCGAGATC TGAAAATCGT CAATGCCATT TTACCGAACA AATTACCTGA TAAGGTTCGT GATTATCTTA ACCCGCGTTC ACGGATCTCA TACTTCTTTG ACAGCGAAGA GTAA
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Protein sequence | MASIKITVDR LQPGLYIRLP VKWNEHPFLF NSFKIKSQEQ IQLIKHLGIQ HVFLNPGLSD SQPLPPSVEE ATPEEALPPV DSEAEKLWQE KQTRIEKLNE YRRRVQTCEK EFERSLARMR AVVNKIRNRP LDAVGEAIIL VDDIVDKLLS DDNVTLHLMN SKSEFEDIYF HSLNVSVIAM MIGKARGLPA ERIKELAFAA LFHDIGKVRV PTAIVRKKTP LTEPEENYLR LHTKYGIELA DNIETFPESA KRVIEQHHEL RDGSGYPLGL KGDDIDELAQ IVAVANAFDN LCHPNIPSEQ KIPYVALSHL FKNCKHLYNA ENLGILVKFM GVFPPGTVVQ LSNDMVGLVI SVNASSLLYP NVLIYDPSVP RSQATIIDLA DRDLKIVNAI LPNKLPDKVR DYLNPRSRIS YFFDSEE
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