| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1953 |
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| Symbol | gltD |
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| ID | 5135146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2088890 |
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| End bp | 2090359 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533410 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001217877 |
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| Protein GI | 147675131 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAG CAACCGGATT TTTAGAATTT GGTCGTGAAC TGCCGAAAAA AATCGACCCG
GCAGAGCGCA TCAAAAACAA CAAAGAGTTT GTCCTTAACC AAGAGTTTGG TAAGAAGATC
AATCAGCAAG CTTCACGTTG TATGGATTGT GGCGTGCCGT TTTGTCATAA CGGCTGCCCG
ATTGGCAACA TCATTCCCGA GTTTAACGAT GCAGTGTATC GCGACAGTTG GGAAGAGGCT
TGGAATATTC TGAGCTCGAC CAACAACTTC CCAGAGTTTA CCGGTCGTGT CTGCCCTGCA
CCTTGTGAAA CCGCCTGTGT GCTTGGCATC AACCAAGATC CGATCACCAT CTGTAACATT
GAAAAAACCA TTGTGGAACG TGCTTACCAA GAAGGCTATG CCAAGCCGAA AACGCCACGT
TCACGCACCG GAAAAACGGT CGCGATCATT GGCTCAGGCC CTGCGGGGCT GGCCGCGGCG
GAGCAGTTGA ATGCCGCGGG TCATAGCGTC ACCGTGTTTG AGCGGGATGA AAAAGTCGGC
GGCTTGCTGC GCTTTGGCAT TCCCGATTTC AAACTCGGTA TGGATGTGAT TGATCGCAAA
ATCAATCTGA TGGAACAAGC GGGCGTTAAG TTCGTGGTCA ATGCGCATAT CGGTGTAGAC
ATCAACGCTC AACAGTTGCG TCAGGAGTTT GATGCGGTAT TGCTGACGGG CGGCTCAACC
GTACCACGTG ATCTGAGCAT TCCCGGACGT GATCTGAAAG GCGTTTACTT CGCGATGCAG
TTCCTCGCGC AAAATAACCG CCGAGCCAAT GGCATGGATC TGAAAGGTGA AGAGATCCAC
GCTAAAGGCA AACATGTGGT AGTGATCGGA GGCGGCGATA CTGGCTCCGA CTGTGTCGGC
ACCTCTAACC GCCACGGCGC TGCGAGTATC ACTCAAGTGG AGATCATGCC GATCCCACCG
CAAAAGCGCC CAGTGAATAT GCCTTGGCCG CAATATCCGA TGATTCTGCG CACCTCTACC
TCTCATGAAG AAGGCTGTGA GCGTCATTGG AACATCCTCA CCAAAGAGTT CATTGGTAAT
GAACAAGGTG AAGTGACGGG TCTACGCATC GCTGACATCG TTTGGAAAGA TGCAGCCCCC
GGTGAGCGAC CAAGCTTTGA CGAAGTGGTG GGCAGTGAAC GCGTCATTCC TTGTGATATG
GCATTTCTGG CGATGGGCTT CTTGCATCCA GAGCCACACG GCGTGCTTGC TCAGTTGGGG
ATTAAGCTTG ATGAGCGCGG CAATGTGGCG ACGCAAGATT TTGCGACCAA CCAAAAAGGC
GTATTCGCCG CAGGTGATAT GCGCACAGGC CAATCCTTGG TGGTGCGCTG TATCAACGAA
GGTCGCGAAT GTGCGCGAGC CGTTGACACC TTCTTGATGG GCAATACCCA TCTTGAGGCA
AAAGCGGACT CACTCATGCT GTCAGCATAA
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| Protein sequence | MGKATGFLEF GRELPKKIDP AERIKNNKEF VLNQEFGKKI NQQASRCMDC GVPFCHNGCP
IGNIIPEFND AVYRDSWEEA WNILSSTNNF PEFTGRVCPA PCETACVLGI NQDPITICNI
EKTIVERAYQ EGYAKPKTPR SRTGKTVAII GSGPAGLAAA EQLNAAGHSV TVFERDEKVG
GLLRFGIPDF KLGMDVIDRK INLMEQAGVK FVVNAHIGVD INAQQLRQEF DAVLLTGGST
VPRDLSIPGR DLKGVYFAMQ FLAQNNRRAN GMDLKGEEIH AKGKHVVVIG GGDTGSDCVG
TSNRHGAASI TQVEIMPIPP QKRPVNMPWP QYPMILRTST SHEEGCERHW NILTKEFIGN
EQGEVTGLRI ADIVWKDAAP GERPSFDEVV GSERVIPCDM AFLAMGFLHP EPHGVLAQLG
IKLDERGNVA TQDFATNQKG VFAAGDMRTG QSLVVRCINE GRECARAVDT FLMGNTHLEA
KADSLMLSA
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