Gene VC0395_A0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0532 
Symbolnth 
ID5136215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp571094 
End bp571735 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID640531990 
Productendonuclease III 
Protein accessionYP_001216483 
Protein GI147674958 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000213835 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACG CGAAACGGAT TGAAATTTTA GAACGGCTGA GGGCTAACAA CCCAAAACCC 
GAAACCGAAT TAAACTGGAA CTCCCCCTTT GAGTTGCTGA TTGCTGTGCT GCTCTCCGCG 
CAAGCAACCG ATGTCAGCGT CAACAAAGCC ACCGATAAAC TGTATGCAGT GGCCAATACG 
CCACAAGCCA TGCTTGATCT AGGTGTTGAT GGCGTCAAAG AGTACATAAA AACCATTGGT 
TTATTTAACT CTAAAGCCGA AAACGTCATC AAAACTTGCC GTATTTTGCT TGAAAAGCAT 
CAAGGTGAAG TGCCGGAAGA TCGTGAAGCA TTAGAAGCGC TGCCAGGCGT TGGGCGTAAA 
ACCGCCAATG TGGTGTTGAA TACAGCCTTT GGCTGGCCGA CTATTGCGGT CGATACGCAC 
ATCTTTCGCG TCTCCAATCG CACCAAATTT GCGGTCGGCA AAAACGTCGA CGAAGTAGAG 
CACAAGCTAC TCAAAGTCGT ACCTAATGAG TTTAAACTCG ATGTGCACCA CTGGCTGATT 
CTGCATGGCC GTTACACCTG TGTCGCGCGC AAACCACGTT GTGGCAGTTG CATTATCGAA 
GATCTTTGTG AATTCAAAGA TAAAGTGTAC CCAGAAAGCT AA
 
Protein sequence
MNNAKRIEIL ERLRANNPKP ETELNWNSPF ELLIAVLLSA QATDVSVNKA TDKLYAVANT 
PQAMLDLGVD GVKEYIKTIG LFNSKAENVI KTCRILLEKH QGEVPEDREA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IFRVSNRTKF AVGKNVDEVE HKLLKVVPNE FKLDVHHWLI 
LHGRYTCVAR KPRCGSCIIE DLCEFKDKVY PES