Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1001 |
Symbol | vctP |
ID | 5134006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 976338 |
End bp | 977339 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531323 |
Product | vibriobactin and enterobactin ABC transporter, periplasmic vibriobactin/enterobactin-binding protein |
Protein accession | YP_001215837 |
Protein GI | 147671457 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000270207 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTTGA TTATAGTACG CACTCTCTTA ATGAGAATAA GTATCAAAAT GATTCCACTT GCTTATCTCA ACCACTTTCG GAAGGAACAT ATGAAATCTC GTATTCATTG GGCTGCATTA GGATTATTGG CTGCGTTTGC TGCACAAGCA GAGACAGTAA CGATTGAACA TCGCTTGGGT AAAACCACCC TTGAGCAGAA ACCGCAACGT GTAGTGGTTA TTGGTGTGGG GGCTCTGGAC GCTATCGACA GTTTCGGTAT TGAGCCGGTT GCCGTTTCCA AATTTGATGG TACTCCTGAC TATCTTGCCA AATACAAGAG TGATAAGTAT CCAAGTGCAG GTTCGTTGTT TGAGCCAGAT TTTGAAACGA TTTATACCCA AAAACCGGAT CTGATTGTGA TTGGGCCGCG TGCATCGAAA AGCTACGACG AGCTATCAAA AATTGCACCG ACCATCGTTT TTGCTGCTGA AGCTGACCAA GGTTATTGGG AAAGCACTCA ACAGCAGTGG CGTAACCTAG GCAAAGTGTT TGCGATTGAG CCTGCGGTCG AAGCCAAAAT TGAGCAAGTT GACGCGCAAT TTAAATCCAT CATGCAATAC AACCAACAAC ATAAAAGTGA TGCGATGTTG GTCATGAGCT CTGGCGGCAA CCTGACGACT TTTGGTGCCA ATTCACGCTT CTCTTCGGTG TACAAAGATT TTGGATTTAG TGAAACCGTG CCAGTCAGCA AAGAGAGCAG CCATGGTGAT CTGATCTCAT TTGAGTACAT CCGTGAACAC AATCCGAAAA CCTTGCTGGT GGTTGACCGA GATAAAGTGG TGACTAAAGG TGAAACCAAT ATTCGCCAAA CCTTTGAAAA TGATCTGGTT AAAGCCACCA CAGCTTACAA AAACGGCCAT ATTGCTTATC TCGATGTGAA TGCTTGGTAC ATCGCTATCT CTGGCGTGAA AGCGACAGAG CAGATGGTTG CCGACATGAA AGCGTCAGTT GGTATGCAGT AA
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Protein sequence | MVLIIVRTLL MRISIKMIPL AYLNHFRKEH MKSRIHWAAL GLLAAFAAQA ETVTIEHRLG KTTLEQKPQR VVVIGVGALD AIDSFGIEPV AVSKFDGTPD YLAKYKSDKY PSAGSLFEPD FETIYTQKPD LIVIGPRASK SYDELSKIAP TIVFAAEADQ GYWESTQQQW RNLGKVFAIE PAVEAKIEQV DAQFKSIMQY NQQHKSDAML VMSSGGNLTT FGANSRFSSV YKDFGFSETV PVSKESSHGD LISFEYIREH NPKTLLVVDR DKVVTKGETN IRQTFENDLV KATTAYKNGH IAYLDVNAWY IAISGVKATE QMVADMKASV GMQ
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