| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1000 |
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| Symbol | vctD |
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| ID | 5134160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 975347 |
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| End bp | 976285 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531322 |
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| Product | vibriobactin and enterobactin ABC transporter, permease protein |
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| Protein accession | YP_001215836 |
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| Protein GI | 147672165 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4606] ABC-type enterochelin transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000321439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAGT TATTGCTTGT TTTAGTTGTT ATTAGTTTTT GTTCCCTGTT TGTTGGCGTG
GGCAATTTAT CCCTCGCAGC CTTGTTTCAA GGTGATGAGT CAGCTTGGCA GTTACTGCTG
ACTAGCCGAG TCCCCCGATT ATTAGCGATT TTGCTCTCCG GTGCGGGTTT AAGCATCGCG
GGTCTTATCA TGCAGCAAGT GAGTCAAAAC CGATTTGCCT CACCATCGAC TTCCGGCACG
ATTGAGTGTG CCATGCTCGG TTACGTGCTT AGCCTAGTTC TGTTTGGCCA TGGTCAAAAC
CTCTGGTTGA TTTTCGGCGT CTCCATGTTG GGTACGCTGG TCTTTGTGTT TTTCATTCAG
CGCATTCAGT TTAAAAACGT CATTTTCGTG CCGCTGATCG GCATCATTTT TGGCAATGTG
ATTGACTCTT TGGCGACCTT TATTGCCTAC AAATATGATG CTATCCAAAA TCTTTCCGGT
TGGGCTGTTG CCAATTTTGC CAACCTGCTT AAAGGGGATT TTGAACTGCT CTATATCGCA
ATCCCAGTGG CTATTTTCAG CTATTTGTAC GCCGCACGCA TTTCTGCCGT GGGGATGGGA
AAAGATTTTG CGACCAATCT GGGTTTGAAT TATCAACAGG TCATGATCAT CGGTGTGGCC
TTAGTCTCCA TCATGTCGGC GACCGTGGTC ATGATTGTCG GTCAACTGCC TTTCTTGGGT
TTGATTGTGC CTAATCTAGT CAGCCTCTAT TACGGCGATA ATTTGCGTAA AAATATTCCG
CGCACTGCCA TTTTCGGGGC GATGTTCGTG TTGTTATGTG ATTTAGTGGG GCGCGTCATC
ATCTTCCCGT ATGAAGTCCC CATCTCTATG ATCATCAGTA TTTTAGGTGG TTCGGTGTTT
ATTGCCTTGA TTTTGCGAGG GCAGCGTCAT GCAGGATAG
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| Protein sequence | MKKLLLVLVV ISFCSLFVGV GNLSLAALFQ GDESAWQLLL TSRVPRLLAI LLSGAGLSIA
GLIMQQVSQN RFASPSTSGT IECAMLGYVL SLVLFGHGQN LWLIFGVSML GTLVFVFFIQ
RIQFKNVIFV PLIGIIFGNV IDSLATFIAY KYDAIQNLSG WAVANFANLL KGDFELLYIA
IPVAIFSYLY AARISAVGMG KDFATNLGLN YQQVMIIGVA LVSIMSATVV MIVGQLPFLG
LIVPNLVSLY YGDNLRKNIP RTAIFGAMFV LLCDLVGRVI IFPYEVPISM IISILGGSVF
IALILRGQRH AG
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