Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0704 |
Symbol | |
ID | 5134244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 764900 |
End bp | 766558 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531026 |
Product | hypothetical protein |
Protein accession | YP_001215540 |
Protein GI | 147672286 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGCAAC CCACCCACAG CTCACATGCG CGCAAAGCGC TGCTTTCAGA GCGAATCAAT AAGCTGGCCA AGGCGCTCTC TGATGGCGTG TATGAGCGTG AAAATACCAT CAAGCTCTGT TTATTGACCG CCTTGGCTGG TGAAAGTGTG TTTTTGCTCG GCCCTCCGGG GATCGCCAAA AGCCTCATCG CTAAGCGTTT GATTCAAGCA TTTGATAACA GCAGTTATTT TGAATACCTG ATGACCCGCT TTTCAACCCC CGAAGAGGTG TTTGGGCCGC TGAGTATTCA AGAATTGAAA GACAATGGTC GTTATGTGCG CCTCACCCAA GGTTATTTGC CTACCGCACA GGTCGTGTTC TTGGATGAAA TCTGGAAGGC GGGACCTGCC ATCCTCAACA CCTTACTAAC GGTTGTCAAC GAGAAAACCT TCAAAAATGG CAGCGATATT GAGCGCGTAC CGATGCGTCT CTTGGTGACG GCCTCCAATG AACTCCCAGA CGAAGACAGC GGCCTCGAAG CACTCTATGA CCGTATGCTG GTACGAATTT TTGTAAATCG AATCCAAAAC AAACAAAATT TCAAATCCAT GCTTACCGTT GGTACAGCGC AAGAAGCGCA AATTCCAGCA GGGCTGGCGA TCACCGATGA AGAGTATCAC CAATGGCAGC AGCAACTGGA TAAGCTTGAA CTCAGTGATG ACGTTTTCGA AAAGCTCTAC CAGTTGAAAA CCATGGTTGA AGAGCGCTCA AAAGAGAGCG CGGGTTCAGA TTTAGAGATG TATGTGTCTG ACCGCCGTTG GAAAAAAGCG GCCAAACTTT TGAAAGCCAG TGCATTTTTT AATGGCCGAG ACGAGATTAA CCCATTAGAT CTACTGCTGC TGCAAAACTG TTTGTGGAAT ACCCCAGAAT CACATGATGT GGTGCATGAG GTGATCCGCG AATTTGCGCT GCGTTACGCC TTTGACCAAG CAGAAGTGGA GCAACAGCTC GATGTATGCC GACTTGAACT TGCCCAAATT CAAGAAGAGC TAGAGTCTGA GTTTGCCATG GTACTGTCAC TGGAAACCAC CAATGGCTTA ATCAAAAAAC AAGTTCATCA TCAATATGAC CTGTCTGATG CCAAAATTTA CAAAGTGGGC ATGACGCCTG ATTTGATTAA GCTAGTGTTA TTGCAGAGCA ATATGTCTGT TTCTGAAGGT GAGAAAGGCG ATAGCCGTTG GATTTACGTA CAGAAAAGTG AATTAGAGCG CGTGATTAAA GAAGGGCACG GCGAAGCCTA TGGCTATGTG AACCAAAACA CCAATCTATG TCGCTTACGT TTTGACCTTG ATGCCAGCAA CAACTTGGTG ATTAAAGATA TTGCCAACCG CTCCGTACTT CTGGCGATGG TCACCAAACA AGGTTTAGAT GAGTCGCTGT ATCAGAATTG GTTGACGAAA GCGGATCAAG CCATGGCGCA GCTCACTCAT GCGGAGCACC ATTTACGTAA AGTGCGCCTC AAATTTCACG ATGCGCTGCC GCACAGTTTC ATCGATCCTG AATTGCCAAC GGCAATGCAA GCGACCTTGC ATGAGCTGCA GCAGCAGTTG GATGCCACTC AAGTTGAATG CGAGCGTAAC GTGATGCGCA TTCGTAACCT CAACCAATTT TTTGCTTAG
|
Protein sequence | MLQPTHSSHA RKALLSERIN KLAKALSDGV YERENTIKLC LLTALAGESV FLLGPPGIAK SLIAKRLIQA FDNSSYFEYL MTRFSTPEEV FGPLSIQELK DNGRYVRLTQ GYLPTAQVVF LDEIWKAGPA ILNTLLTVVN EKTFKNGSDI ERVPMRLLVT ASNELPDEDS GLEALYDRML VRIFVNRIQN KQNFKSMLTV GTAQEAQIPA GLAITDEEYH QWQQQLDKLE LSDDVFEKLY QLKTMVEERS KESAGSDLEM YVSDRRWKKA AKLLKASAFF NGRDEINPLD LLLLQNCLWN TPESHDVVHE VIREFALRYA FDQAEVEQQL DVCRLELAQI QEELESEFAM VLSLETTNGL IKKQVHHQYD LSDAKIYKVG MTPDLIKLVL LQSNMSVSEG EKGDSRWIYV QKSELERVIK EGHGEAYGYV NQNTNLCRLR FDLDASNNLV IKDIANRSVL LAMVTKQGLD ESLYQNWLTK ADQAMAQLTH AEHHLRKVRL KFHDALPHSF IDPELPTAMQ ATLHELQQQL DATQVECERN VMRIRNLNQF FA
|
| |