Gene VC0395_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0452 
SymbolfruR 
ID5134412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp502102 
End bp503082 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content50% 
IMG OID640530775 
ProductDNA-binding transcriptional regulator FruR 
Protein accessionYP_001215293 
Protein GI147672493 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR02417] D-fructose-responsive transcription factor 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGG ATGAAATCGC GAAATTAGCT GGTGTATCGA AAACCACCGC CAGTTATGTG 
ATCAACGGCA AGGCGCAGAA GTATCGGATC AGTGAGAAAA CGCAGCACAA AGTGATGGCT
GTGGTGGAGC AGTATAATTT CCGGCCGGAT CATGCCGCAT CGGCATTGCG TGCAGGCAAT
AGCCGCTCGT TTGGTTTAAT CATTCCGGAT CTGGAAAACA CCAGTTATGC GCGTTTGGCA
AAATTACTTG AACAAAACTC GCGGCAAGCC GGCTACCAAA TTTTGATCGC TTGTTCGGAT
GATGATCCAC AAATTGAAAT GGCAGCGGCT GAAGCCTTAG TCTCTCGCCG AATCGACGCT
CTGTTTGTGG CGAGTGGAAT TCCGAGTGCC AGCGAGTATT ACCTCAAGCT GCAACAATCC
GGAACGCCTG TGATTGCGAT TGACCGTGCC TTGGATGATG AGTATTTCTC CTGCGTGATC
AGTGAAGACT TTGGCGCGGC ATTTGAGTTA ACGCGTTCCG TGCTTACTCA GGATGTGCAC
AGCGTCGGTT TGGTTGGCGC TCTGCCCGAA CTGAATGTGT CGCGTGAACG TGAACAAGGG
TTTGCCATGG CGGTTAAGCA GCGCGGTTTA CCAACCACTC TAGGTTATGG TGAGCATTTT
AACCGTGAAG AGGGGCGTAA AGTATTTGCC AAATGGGTGG CGAATGATCA GTTGCCTGAT
GCGGTAGTGG CAACATCCTA TACGCTCCTT GAAGGCATTC TTGATGTTTT GCTTGAGCAG
CCAGAATTGA TGCAAAAAGT TCGCTTAGCG ACCTTTGGTG ATAACCGCTT ACTCGACTTT
TTACCCATCC GAGTGAATTC TCTGCCTCAG CAATTTGAAT TGATTGCCGA TAGCGCATTA
GCCTTGGCGC TGAACGCGTC GGCGAAACGT TATCAAACGG GGATCGAGCT CATTCCACGT
CAGTTAAAGG TGCGCACTTA A
 
Protein sequence
MTLDEIAKLA GVSKTTASYV INGKAQKYRI SEKTQHKVMA VVEQYNFRPD HAASALRAGN 
SRSFGLIIPD LENTSYARLA KLLEQNSRQA GYQILIACSD DDPQIEMAAA EALVSRRIDA
LFVASGIPSA SEYYLKLQQS GTPVIAIDRA LDDEYFSCVI SEDFGAAFEL TRSVLTQDVH
SVGLVGALPE LNVSREREQG FAMAVKQRGL PTTLGYGEHF NREEGRKVFA KWVANDQLPD
AVVATSYTLL EGILDVLLEQ PELMQKVRLA TFGDNRLLDF LPIRVNSLPQ QFELIADSAL
ALALNASAKR YQTGIELIPR QLKVRT