| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0326 |
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| Symbol | exbB1 |
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| ID | 5134687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 357982 |
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| End bp | 358668 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530649 |
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| Product | TonB system transport protein ExbB1 |
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| Protein accession | YP_001215167 |
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| Protein GI | 147672293 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000000984448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATCGT TACAACAACT CCAACACCAG CTAGGCCTGA TGGCTTGGCC ACTTTTCATT
TGCTCAGCAT TAACGGTAAT GCTGCTCGCG GAGCGCCTAT TTCAAGTGCT GCTCAGTTTA
ACCGTAGGCA AAGGAGCGAT TCGTCACGCT TTGCAAGCTA CCTCCCCAAA AAACCCAAAG
CAACTGGCTG AACTTACAGA GCATTTCGCG AGTAAGCGTC CGGTGCTGTA TCGCGGAGTG
GCGATGCTTT TGGCCCATCA CCAATTTGAT AAATCACTGC GCGAAGATGC GGCGGGCATT
TGGCTACAGG AGCAACGTCA CCAGTTTAAC TCGGGATTGC GTCTCTTGAC TTTGATTGGC
GTGATCAGCC CTTTACTCGG TCTATTAGGT ACCGTACTTG GCCTGATTGA AATGTTTAAA
GGGGTGGCCG CCACGACCGG AAGTATTACC CCCAATGTGT TAGCCGATGG TTTAGGGGTT
GCAATGTACA CCACGGCAGC CGGTCTACTG ATTGCCGTTC CGGCAGTTGC GGGGGCCCAA
TTGCTCAACC TGTGGGCGGA TCGCACTATG GCTAAACTGG AACATACACT GAACTACGTG
AACCTGTGGC TAGAAGGCAT GACACTGCAC GCCGATGCTT CACTGACAGT CGTGACACCG
CAAGAGGCCA CAACGGAAAA CCTATGA
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| Protein sequence | MESLQQLQHQ LGLMAWPLFI CSALTVMLLA ERLFQVLLSL TVGKGAIRHA LQATSPKNPK
QLAELTEHFA SKRPVLYRGV AMLLAHHQFD KSLREDAAGI WLQEQRHQFN SGLRLLTLIG
VISPLLGLLG TVLGLIEMFK GVAATTGSIT PNVLADGLGV AMYTTAAGLL IAVPAVAGAQ
LLNLWADRTM AKLEHTLNYV NLWLEGMTLH ADASLTVVTP QEATTENL
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