| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0006 |
|---|
| Symbol | hisS |
|---|
| ID | 5131184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 8315 |
|---|
| End bp | 9571 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640528907 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001213476 |
|---|
| Protein GI | 147668658 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACCAGT CACCTAGAGG TACAGAAGAT ATATTGCCTG AAGACCAGCC TTACTGGCAT
TTCGTCAGGC AGCAAGCCGC CCGTATAGCC GCCCTGTATG GTTACCAGAG AACAGATACC
CCTGTATTTG AGGATGCCGG GCTGTTTGTA CGCAGTGTGG GTGAAGGGAC GGATATTGTC
TCCAAAGAAA TGTATACGTT TGAAGACCGG GGCGGAGATA AACTGACCTT GCGCCCTGAG
GGGACTGCAC CTGTCTGCCG GGCGTACCTG GAGCATGGCA TGCAGACCCG TACCAAGCCG
GTCAAGCTTT ATTACCTGAG CTCTATTTTC CGTTATGACC GCCCTCAGGC CGGGCGTTAC
CGCCAGCACC ATCAGTTTGG TTTTGAAGCT ATTGGCGAGG CTGATGCTTC GCTGGATGCT
GAGATAATAG AAATGGCCTG GAGTTTTTAC AATCTGCTGG GCATTACCGA CCTTTCGCTG
GAATTGAACA GCATAGGTTG CCGGCAGTGC CGCCCGAATT ATATTTCGGC ACTTAAAGAT
TACTACCAGC AACATGCGGG CAAACTCTGC CCTGACTGTA ATACCCGTCT GGATAAAAAT
ACTCTGCGCC TGCTGGACTG CAAACGGGCG GAATGCCAAG CTGTGGCTGG AAATGCCCCT
AGAAGTGCAG ATTACCTTTG CCCGGACTGC CTTGCCCACT ATAGCCGCCT GAAAGAGTGT
CTGACAATTT TAGACCTGCC ATTTCATGAG AATTTCCGTC TGGTAAGGGG TCTTGATTAT
TACAGCCGCA CGGTTTTTGA AATTCAGCCC ATGGCAGAAG GTGCCCAGAG CACCATTGGC
GGCGGCGGAC GCTATGACGG GCTGATAGAA CAGCTTGGCG GAGAGGCTAC CCCGGCTATG
GGGTTTGCTA CCGGTATTGA GCGGATTATT TTAAACCTGA AGCGTCAGGG TATTGTGCCT
TCTCCCTTGC CGTCTCCCGC TGTTTTTCTG GCCTATATGG GAGAGACAGC GTCTTTGGCT
TCATTTGCTT TGGCATCAGA CCTGCGTAAA GCAGGCATAG GGATATACCA GACATATGCC
CAGAAAAGCA TCAAGGCTCA GCTCAGGCAG GCTAACAGTT TGGGGGTAGA CTGGGTGGTA
ATACTGGGTG AAGAAGAACT GAAGCAGGGC TGTGCCGTTC TTCGGAATAT GAAGGAAGCC
GGGCAGGCAA ATATACCTCT TGACCAACTT ATATGTGAGA TAAAGAAGCA GATATGA
|
|---|
| Protein sequence | MYQSPRGTED ILPEDQPYWH FVRQQAARIA ALYGYQRTDT PVFEDAGLFV RSVGEGTDIV
SKEMYTFEDR GGDKLTLRPE GTAPVCRAYL EHGMQTRTKP VKLYYLSSIF RYDRPQAGRY
RQHHQFGFEA IGEADASLDA EIIEMAWSFY NLLGITDLSL ELNSIGCRQC RPNYISALKD
YYQQHAGKLC PDCNTRLDKN TLRLLDCKRA ECQAVAGNAP RSADYLCPDC LAHYSRLKEC
LTILDLPFHE NFRLVRGLDY YSRTVFEIQP MAEGAQSTIG GGGRYDGLIE QLGGEATPAM
GFATGIERII LNLKRQGIVP SPLPSPAVFL AYMGETASLA SFALASDLRK AGIGIYQTYA
QKSIKAQLRQ ANSLGVDWVV ILGEEELKQG CAVLRNMKEA GQANIPLDQL ICEIKKQI
|
|---|
| |