| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4942 |
|---|
| Symbol | |
|---|
| ID | 5094212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5969791 |
|---|
| End bp | 5971104 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644744367 |
|---|
| Product | MiaB-like tRNA modifying enzyme YliG |
|---|
| Protein accession | YP_001197260 |
|---|
| Protein GI | 146302669 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0588845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCA AGTCTTTAAA AAAGAACAAA ATTAACGTAA TCACTCTTGG GTGTTCAAAA
AATGTATATG ACAGTGAAGT GCTTATGGGA CAACTTCGTG CTAACGGAAA AGAAGTTACA
CACGAAGCCA CTGCTAAGGA TGAAGGAAAC ATTATTGTAA TTAACACTTG TGGATTTATT
GACAACGCGA AAGCTGAATC AGTAAACATG ATTTTGGAAT ATGCTGATAA AAAAGACAAA
GGTTTAGTTG ATAAAGTTTT CGTTACCGGA TGTTTGTCTG AACGTTACAG ACCTGATTTA
GAAAAAGAAA TTCCAAATGT GGATCAATAT TTTGGTACAA CTGAGTTACC TCAATTATTG
AAAGCTTTAG GAGCCGATTA TAAACATGAA TTATTAGGAG AAAGATTAAC TACAACTCCT
AAAAATTATG CCTATTTAAA AATTGCCGAA GGATGCGACA GACCTTGCAG TTTCTGTGCA
ATTCCGTTAA TGAGAGGTTC GCATGTTTCT CAGCCAATTG AAAAATTAGT TAAAGAAGCA
CAAGGTTTAG CAAAAAACGG CGTTAAAGAA TTAATATTAA TTGCTCAGGA TTTGACTTAT
TACGGTTTAG ATCTTTATAA AAAGAGAAAT CTGGCAGAAT TATTAGAAGC TTTAGCAGCT
GTTGAAGGAA TTGAATGGAT TCGTCTGCAT TATGCTTATC CTACCGGTTT CCCAATGGAT
GTTTTGGAAT TAATGAAACG CGAGCCAAAA ATTTGTAATT ATATTGATAT TCCATTGCAG
CATATTTCAG ATTCAATTTT GAAATCAATG CGTCGTGGTA CAACTCAGGC TAAAACAACT
CAGTTATTAA AAGATTTCCG TGCTGCAGTT CCGGGAATGG CAATTAGAAC TACTTTAATT
GTAGGGTATC CAGGAGAAAC GCAGGAAGAT TTTGAAATTT TGAAAGAGTT TGTTCAGGAA
ATGAAGTTTG ACAGAATGGG ATGTTTTGCA TATTCTCATG AAGAAAACAC TCATGCTTAC
TTACTTGAAG ACGATGTTCC GGACGATGTA AAACAGGCAA GAGCAAATGA AATCATGGAG
CTTCAGTCTC AAATTTCATG GGATCTAAAC CAAGAGAAAG TTGGACAAGT ATTTAGATGT
ATCATTGACA GAAAAGAAGG TGCTCATTTT GTGGGAAGAA CAGAATTTGA CAGCCCGGAT
GTTGACAACG AAGTTTTAAT TGACGCATCT AAGCATTATG TAAAAACAGG CGAATTTGTT
AATATCAAGA TAATTGAAGC AACAGAATTT GATTTATACG GAGAACCTGC TTAA
|
|---|
| Protein sequence | MRTKSLKKNK INVITLGCSK NVYDSEVLMG QLRANGKEVT HEATAKDEGN IIVINTCGFI
DNAKAESVNM ILEYADKKDK GLVDKVFVTG CLSERYRPDL EKEIPNVDQY FGTTELPQLL
KALGADYKHE LLGERLTTTP KNYAYLKIAE GCDRPCSFCA IPLMRGSHVS QPIEKLVKEA
QGLAKNGVKE LILIAQDLTY YGLDLYKKRN LAELLEALAA VEGIEWIRLH YAYPTGFPMD
VLELMKREPK ICNYIDIPLQ HISDSILKSM RRGTTQAKTT QLLKDFRAAV PGMAIRTTLI
VGYPGETQED FEILKEFVQE MKFDRMGCFA YSHEENTHAY LLEDDVPDDV KQARANEIME
LQSQISWDLN QEKVGQVFRC IIDRKEGAHF VGRTEFDSPD VDNEVLIDAS KHYVKTGEFV
NIKIIEATEF DLYGEPA
|
|---|
| |