Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4709 |
Symbol | |
ID | 5092407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5684380 |
End bp | 5685807 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644744130 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001197027 |
Protein GI | 146302436 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAT GTATCTCTGT TTTTGATATG CTTAAAATTG GCGTTGGCCC TTCAAGCTCA CATACTTTGG GTCCGTGGAG AGCTGCCGAA CGCTTTCTCG AAGAGTTAAA AAGCGAGTCG ATTTTAGACC AGATTAAACG AGTAAAAGTC GATTTATACG GATCACTTTC CTTAACCGGA AAAGGTCATG CTACAGATTT ATCGGTTATG CTTGGTTTAA GTGGTCAGGA TCCTGAATAT ATTCCGGTTG AGAATATTGC CGGAATTATC AAAACAATCG AAGACACAAA CGAAATAAAT CTTGCAAATG AATTTAAAAT TCCGTTTTAT TTTCTGCAGG ATATTGTTTT CAATAAAGAT TTTCTTCCTT TCCATGCTAA CGGATTAAAA TTTACGGCTT ATAAAAATGA TGATTCAGAA TACGAATCTA CATTTTATTC CATAGGCGGT GGTTTTGTTG TGAAAGAAGA ACGCGAAAAT GCCAAGATAA AAGAAGTTAT AAAATGTGCA TTTCCGTTTC CTATTCAAAA TGCGGTTGAA CTTTTAAATT ATACAATTTC TGAAAACAAA TCGATTTCTG AAATTGTGTA TGAAAACGAA AAATCAATGC GTTCTGAAGA AGAAATCCAT TCAGAATTAA TGCGTATCTG GAATACGATG CTTGAATGTA TGTATATTGG CTGTCATACC GGAGGAATTC TTCCGGGCGG CTTACACGTT CGCAGACGAG CTTTTGATAT GCACCAAAAT TTAATTGGTT TATCAAATTA CAACGATCCC CAATCGTGGC TGGAAGAAAT TAGAAAAACC GAGGTTAAAT TCCGTCAGAT TTTAAAATGG GTAAGCTGTT TTGCTCTTGC CGTAAATGAA GTAAATGCTT CTTTAGGACG AGTTGTAACG GCGCCGACTA ACGGAAGCGC AGGCGTTATT CCGGCCGTTT TAATGTATTA TATGGTAATT GAAAACCATG ATGCCGGAGA AAAAGAAATC AAACAATTTT TAATGGTTGC CGGGGAAATT GGCAGCATCT TTAAAAAAGG ATCAACAATT TCTGCTGCAA TGGGCGGTTG TCAGGCCGAA ATTGGTGTTT CGTCGTCTAT GGCTGCGGCG GCACTCTGCG AATTAATGGG CGGTACTCCT GCTCAGGTTT TAATGGCTGC CGAAATTGCA ATGGAGCATC ATTTAGGTTT AACCTGTGAT CCTATTGGCG GTTTAGTTCA AATTCCGTGT ATTGAAAGAA ATACTATGGG TGCCATAAAA GCTATTAATG CAGCTGAACT GGCGCTTGAA ACTGATTCTA AAAACGCAAA AGTGCCTTTA GACAAAGTTA TCAATACAAT GTGGGAAACC GCAAAAGATA TGAATTCTAA ATACAAAGAA ACTTCTGAAG GAGGTCTTGC CGTGGCAGTA AACATGGCAG ATTGCTAA
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Protein sequence | MEECISVFDM LKIGVGPSSS HTLGPWRAAE RFLEELKSES ILDQIKRVKV DLYGSLSLTG KGHATDLSVM LGLSGQDPEY IPVENIAGII KTIEDTNEIN LANEFKIPFY FLQDIVFNKD FLPFHANGLK FTAYKNDDSE YESTFYSIGG GFVVKEEREN AKIKEVIKCA FPFPIQNAVE LLNYTISENK SISEIVYENE KSMRSEEEIH SELMRIWNTM LECMYIGCHT GGILPGGLHV RRRAFDMHQN LIGLSNYNDP QSWLEEIRKT EVKFRQILKW VSCFALAVNE VNASLGRVVT APTNGSAGVI PAVLMYYMVI ENHDAGEKEI KQFLMVAGEI GSIFKKGSTI SAAMGGCQAE IGVSSSMAAA ALCELMGGTP AQVLMAAEIA MEHHLGLTCD PIGGLVQIPC IERNTMGAIK AINAAELALE TDSKNAKVPL DKVINTMWET AKDMNSKYKE TSEGGLAVAV NMADC
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