| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1309 |
|---|
| Symbol | |
|---|
| ID | 5094013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1493361 |
|---|
| End bp | 1494164 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644740712 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001193660 |
|---|
| Protein GI | 146299069 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TTTTTATCAC AGGCGCATCA TCAGGTTTAG GAAAAGCAAC AGCAAAATTA
TTCCACGAAA AAGGATGGAA TGTAATTGCA ACCATGAGAA CTCCAGAAAA AGAAACAGAA
CTTTCTCAAT TAAAAAATGT AACGCTTTTA CCATTAGACG TCACCAATTA CGATCAAATT
CAAAACACAG TAAAAAAGGC ATTGGAACTA AGCGATATCG ACGTTGTTTT TAATAACGCG
GGATATGGAT TAATTGGGCC TTTGGAAAGT CTTTCTGACG ATCAAATCAC CAAACAATTA
AACACTAACT TATTAGGAGT TATTCGAGTT ACCAATGCTT TTATTCCATA TTTCAGAGAA
AGAAAAAGCG GTTTATTTAT CTCAACAACT TCTATTGGCG GATTAATCGC TTTCCCTTTA
GGATCTGTTT ATCACGCAAC GAAATGGGGA TTGGAAGGTT GGAGTGAAAG CATGGCTTAC
GAATTAAATC CGTTTGGCGT ACATATTAAA ACGGTTTCTC CGGGTGGTAT TAAAACAGAA
TTTCTTCACG GCTCTCTTGA CACAGGAGCA AAACCAGAAT ACGAAGCTAT GACCAACAGT
ATGTTTGCAA GTGTTGACAC GATGTTTGAA ATGGCATCAA CTCCAGAACA AATTGCCGAT
GTGGTTTATG AAGCTGCAAC TGACGGAAAA AATCAGCTAA GATATGTTGC TGGTGAAGAT
GCAAAAGCAC TTTACAAACA AAGATTAGAA TTAGGCGCAG AGACTTTCCG TACTGAATTT
GGAAAACAGT TTCTTGGAGC ATAA
|
|---|
| Protein sequence | MKTIFITGAS SGLGKATAKL FHEKGWNVIA TMRTPEKETE LSQLKNVTLL PLDVTNYDQI
QNTVKKALEL SDIDVVFNNA GYGLIGPLES LSDDQITKQL NTNLLGVIRV TNAFIPYFRE
RKSGLFISTT SIGGLIAFPL GSVYHATKWG LEGWSESMAY ELNPFGVHIK TVSPGGIKTE
FLHGSLDTGA KPEYEAMTNS MFASVDTMFE MASTPEQIAD VVYEAATDGK NQLRYVAGED
AKALYKQRLE LGAETFRTEF GKQFLGA
|
|---|
| |