| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0928 |
|---|
| Symbol | |
|---|
| ID | 5091342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1041110 |
|---|
| End bp | 1043362 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740328 |
|---|
| Product | TonB-dependent receptor, plug |
|---|
| Protein accession | YP_001193281 |
|---|
| Protein GI | 146298690 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.228004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT TATTTTTGAC AATATTAATA ATAACATCTA AATGTATATA TTCTCAAAAT
ATATCAGGAA AAATAATCAC AAATAGTCCT GTTGTGCAGG GAATTAATAT TAGTTTGTTA
AATACAAACT TTAAAACAAA AACCGATTCT TTAGGAATTT ATCAGTTTCT AAATATTCCA
AAAGGAACCT ATAAAATACA AGTGACCTCT ACAGGATTCA AACCTATAGT TCAAAGAATA
TCCCTTTTAG AAAATCAGGA TTTGAATTTA GATTTTGAAT TAGAAGAAGA TCAAAACGAA
TTGAACGAAG TTGTAGTTTC GGGAACTTTA AAACCTGTAA AACGATTAGA AAGTGCTGTT
CCTGTTGAGG TGTATTCTCC GGTTTTTTTC AAGAAAAACC CAACCCCAAG TATTTATGAT
GCGCTCCAGA ACATAAATGG CGTTCGTCCG CAATTGAATT GCGGTGTCTG TAATACGGGA
GATATTCATA TAAACGGATT AGAAGGTCCA TATACTTTGG TAATGATCGA CGGAATGCCA
ATTGTAAGCA GTCTTTCGAC GGTTTACGGT TTGTCTGGAA TTCCAAATTC ATTGGTTGAA
AGAATTGAAA TTGTAAAAGG TCCCGCTTCG TCTCTTTACG GAAGTGAGGC AGTTGGCGGT
TTGATTAATA TTATTACTAA AAATCCAACC AATGCTCCGG CTTTTTCTGC GGATTATTTT
ACGACTTCTT ATTTTGAAAG TAATCTTGAC TTGGGAATGA AGTTTAATGC AGGTAAAAAA
GCAGTTTCAC TTATCGGAAT TAATTATTTT AACTACGATC AGGTTATCGA TAAAGACAAA
GATAATTTTA CTGATGTCAC GCTTTCTGAA CGAATTTCGG TTTTTAATAA ATGGAGTTTT
AAGCGAAATC ATAATCGCCT TTTTACCATT GCAGCACGCG GAATGTACGA AGACCGATGG
GGAGGAGACA TTCGCTGGGA AAAGAAATAC CGAGGCGGTG ACGAAATCTA CGGCGAAAGT
ATTTATACCA AAAGAGCCGA ATTAATTGGA AGCTACCAAT TACCTTTTGA AGAAAAACTA
ATGTTTTCGT TCTCCGGAAA TGTTCATTAT CAGGACAGCC GATACGGAAC GACATCATAT
ATTGCCAATC AGAAAATTGG ATTTGTGCAA TTAACGTGGG ATAAAAAAAT TGGACGAAAC
GATCTGCTGG CGGGAATTGC AAGCCGATAT ACGTATTATG ACGATAATAC ACCAGCAACT
AAAGAGGCTG AAAATACCTG GCTACCCGGA ATTTTTGTTC AGGACGAAAT TACATTTTCT
CCCAAAAGTC AGGTTTTGCT GGGAGCGAGA TACGATTATA ACTCGATTCA CGGGTCGATA
TTTACACCAA GATTTGCTTA TCGGTTTAAA GCAGACGAAA ACACAATTTT TAGATTAAAT
GCAGGAACAG GATTTCGGGT TGTGAATCTA TTTACCGAAG ATCATGCCGC TTTAACAGGT
TCGAGAGATG TTGTTATTAA AAATGACTTG AAACCAGAGA AATCAGTAAA CGTGAATTTG
AATTATATTC AGAAGATCAA CTTTGGAAAT GGAACATTTA TGGGAATTGA AACAACAGCT
TTTTATACCA GATTCAGCAA CAAGATTATT TCAGATTATG AAACAAATCC AAACGAAATC
ATTTACAATA ATATTGACGG TTACGCTTTA AGTCAGGGAA TCAGCACGAA TATTGATCTT
AATTTTCCAT CGGGATTAAA ATTTATTGTG GGAGCAACGG TTTTAGATAA TAAAAATGTC
GAAAACGGAA TTTCAGAAAG ACCTTATTTG ACTGAGAATT TTACAGGAAC GTGGAGCATT
TCATATAAAA TTCAGCCTTG GGATTTATCA ATAGATTATA CAGGAAATGT TTACAGTCCA
ATGAAACTTC CTTTGTTAAG TGAAACAGAT CCAAGAAGTC CAAAATCACC TTGGTATAGT
ATTCAAAACA TTCAGTTTAC CTATTCGGGA TGGAAAGATT TTGAAGTTTA TGGCGGAGTT
AAAAACTTAT TGAACTTTAC GCCAAAACAA AATAATCCCT TTTTAATTTC GAGAACCAAT
GACCCGTTTG ATAAAAATGT GCAATACGAT TCAGCAGGAA AAGTATTGGT TACTCCTGAT
AATCCGTATG GTTTGACGTT TGATACCACT TATGTTTATG GGCAAAACCA GACTATTCGA
GGATTTTTGG GATTGCGATA TACTTTGAGA TAA
|
|---|
| Protein sequence | MKYLFLTILI ITSKCIYSQN ISGKIITNSP VVQGINISLL NTNFKTKTDS LGIYQFLNIP
KGTYKIQVTS TGFKPIVQRI SLLENQDLNL DFELEEDQNE LNEVVVSGTL KPVKRLESAV
PVEVYSPVFF KKNPTPSIYD ALQNINGVRP QLNCGVCNTG DIHINGLEGP YTLVMIDGMP
IVSSLSTVYG LSGIPNSLVE RIEIVKGPAS SLYGSEAVGG LINIITKNPT NAPAFSADYF
TTSYFESNLD LGMKFNAGKK AVSLIGINYF NYDQVIDKDK DNFTDVTLSE RISVFNKWSF
KRNHNRLFTI AARGMYEDRW GGDIRWEKKY RGGDEIYGES IYTKRAELIG SYQLPFEEKL
MFSFSGNVHY QDSRYGTTSY IANQKIGFVQ LTWDKKIGRN DLLAGIASRY TYYDDNTPAT
KEAENTWLPG IFVQDEITFS PKSQVLLGAR YDYNSIHGSI FTPRFAYRFK ADENTIFRLN
AGTGFRVVNL FTEDHAALTG SRDVVIKNDL KPEKSVNVNL NYIQKINFGN GTFMGIETTA
FYTRFSNKII SDYETNPNEI IYNNIDGYAL SQGISTNIDL NFPSGLKFIV GATVLDNKNV
ENGISERPYL TENFTGTWSI SYKIQPWDLS IDYTGNVYSP MKLPLLSETD PRSPKSPWYS
IQNIQFTYSG WKDFEVYGGV KNLLNFTPKQ NNPFLISRTN DPFDKNVQYD SAGKVLVTPD
NPYGLTFDTT YVYGQNQTIR GFLGLRYTLR
|
|---|
| |