Gene Fjoh_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0082 
Symbol 
ID5090849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp87184 
End bp88152 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content37% 
IMG OID644739474 
Producttransport system permease protein 
Protein accessionYP_001192439 
Protein GI146297848 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.85435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG CGAGCATTAG TTTAGGCTCC GTTACGATTC CGTTAAAAGA TGTTTTTTCA 
AGTTTAACCG GGGGACACGC AGCAAAATCG ACCTGGGAAT ATATCATTAT AAATTATCGC
CTGCCAAAAG CGATTACTGC AGTTTTGGTT GGAACCGGGC TGTCAATCAG CGGACTTTTA
ATGCAGACGC TTTTTAGAAA TCCGCTTGCA GGTCCTTATG TTTTAGGATT GAGTTCCGGG
GCAAGTTTAG GTGTTGCTTT TGTCATTTTA GGGGCTGGGT TTCTGCCTTC GTTTTTAAGT
GTAATTGCTT TATCGTCATA CGGAATTGTA ATTGCATCGA CATTTGGAAG CACGTTGGTT
TTGTTATTGG TTTTAATAGT TTCTCAAAGA CTGCGAGACA CAATGGCAAT TTTAATTGTG
GGATTAATGT TTGGAAGTTT TACAACTGCA ATTGTAAGTG TTCTAACGTA TTTTAGTACG
GCAGAACAAT TGCAGAAGTT TACATTTTGG TCAATGGGAA GCTTGGGAAA TCTTTCCTGG
TCAACAATTG GAATCTTGAC TTTTTGTGTT GGAATTGGTC TGCTTTTAAG TGCTAAAAGC
ATCAAGCCTT TAAATGCTTT GCTTTTAGGA GAAAACTATG CAAAAAGCAT GGGATTAAAT
TTTAATCAGG CGAGATTGAT TATAATATTT GCAACCAGTA TTTTATCTGG AGCGATTACG
GCTTTTGCAG GACCAATTGC TTTTATTGGT TTAGCAGTGC CGCATATTGC AAAACTGACT
TTTCAAACGA GTAATCATAC TATTTTGTTT TGGAGTACTT TATTTTTTGG ATCAATTATA
ATGTTGTTTT GTGATATTGT TTCGCAAATG CCGGGATTTG ATGTTACGCT TCCAATAAAT
GCCATAACGT CTATAATTGG TGCGCCGGTT GTAATTTGGC TTCTAGTACG GAAAATAAAT
TTTCAGTAA
 
Protein sequence
MFFASISLGS VTIPLKDVFS SLTGGHAAKS TWEYIIINYR LPKAITAVLV GTGLSISGLL 
MQTLFRNPLA GPYVLGLSSG ASLGVAFVIL GAGFLPSFLS VIALSSYGIV IASTFGSTLV
LLLVLIVSQR LRDTMAILIV GLMFGSFTTA IVSVLTYFST AEQLQKFTFW SMGSLGNLSW
STIGILTFCV GIGLLLSAKS IKPLNALLLG ENYAKSMGLN FNQARLIIIF ATSILSGAIT
AFAGPIAFIG LAVPHIAKLT FQTSNHTILF WSTLFFGSII MLFCDIVSQM PGFDVTLPIN
AITSIIGAPV VIWLLVRKIN FQ