| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0077 |
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| Symbol | |
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| ID | 5090844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 83941 |
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| End bp | 84513 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644739469 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001192434 |
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| Protein GI | 146297843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATCGAC ACTTCATTCT TTTTAAACCT TACGGCTATT TAAGTCAATT TATTTATGAA
TTGAAGAGAA AGAAAAAGCT TTTGGGCGAA CTGCACGATT TTCCCGAAGG AACAATGGCA
ATTGGAAGAT TAGATGAAGA TTCTGAAGGC CTATTGTTAT TAACAACTGA TGGAAAAGTA
AGCGAACAGA TAAGAAGCAA AAAAGTAGAC AAAGAATATT ACGTTCAGGT CGACGGTATA
ATTACGCCTG AAGCCATTGA AAAACTGCAA AAAGGAGTAG AAATTGGTTT TGAAGGCGGT
AAGTACAAAA CAAAACCCTG CACTGCTTTT ATTGTAACCG AAATTCCTGA TTTTGGACCA
AGAGCCAAAA AAATCAGAGA CGAGCGTCAC GGCCCTACTT CCTGGGCTTC TATTACTGTA
AACGAAGGAA AGTTCCGTCA GGTTCGAAAA ATGACTGCAG CAGTTGGTTT TCCTACTTTA
CGTCTCGTTC GTGTTCGAAT AGGAAACGTA TATTTGCAAA ACTTAAAAGC AGGAGAAGTT
TTAGAAGTAA ACGATTTCCA AATAAACGAT TAA
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| Protein sequence | MHRHFILFKP YGYLSQFIYE LKRKKKLLGE LHDFPEGTMA IGRLDEDSEG LLLLTTDGKV
SEQIRSKKVD KEYYVQVDGI ITPEAIEKLQ KGVEIGFEGG KYKTKPCTAF IVTEIPDFGP
RAKKIRDERH GPTSWASITV NEGKFRQVRK MTAAVGFPTL RLVRVRIGNV YLQNLKAGEV
LEVNDFQIND
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