| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1992 |
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| Symbol | |
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| ID | 5103379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1928595 |
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| End bp | 1929209 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507880 |
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| Product | haloacid dehalogenase superfamily protein |
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| Protein accession | YP_001192056 |
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| Protein GI | 146304740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0751619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACCA TGATAACCGA CAAAATAAAC GAGTATATTT CCTCTGTGGA AGAGAAGTTG
ATGTCGAGAT TCGAGAACAG GGAACGCCTG CTCCAGATAT CTAGGGAGGT GATCAGGTAT
TCTGGAGAGA CCATATCCCT AAGTCATAGG GGCAGGAGAG ATGAGGCTCT GGAGAAGTAT
GGTCAAGCTA GGAAGAGAGT TGAGGAGATT AAGAACATTG TACAGAACTT CCCCGAACTC
CTGTTTGGGG ACGTTGGAGT TGCCTTTCAG GAGATCAGCG AAGCGAGCGT AGTGCTCTCC
TTCTATTTCA ACCTACCTTT GAACTTGCCC AGGGACCTTG GAATACCGGA CATCTACTAC
ATCACCGGGT TGGCTGACGC ACTAGGCGAA ATGAGGAGGG CAGCGCTGGA GAGCCTTAGA
AAGGGAGATA AGGCAAGGGG AAGAGAAATT CTAGAGGAAA TGGAGAACCT CTACGACATA
CTCTGGAAAC TGGAGTACCC AAAATCCCTG GTTCCCGGGC TCAGGCAGAA AGTCGATGCC
ATGAGAAAAA TCCTGGAAGA TACCAGACAC GACGTGTTCC TTGCGGAAGT TGTGGGAAAG
GTGGATCAGG ATTAG
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| Protein sequence | MITMITDKIN EYISSVEEKL MSRFENRERL LQISREVIRY SGETISLSHR GRRDEALEKY
GQARKRVEEI KNIVQNFPEL LFGDVGVAFQ EISEASVVLS FYFNLPLNLP RDLGIPDIYY
ITGLADALGE MRRAALESLR KGDKARGREI LEEMENLYDI LWKLEYPKSL VPGLRQKVDA
MRKILEDTRH DVFLAEVVGK VDQD
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