Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1802 |
Symbol | |
ID | 5105365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1740718 |
End bp | 1741488 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640507701 |
Product | translation initiation factor IF-2 subunit alpha |
Protein accession | YP_001191880 |
Protein GI | 146304564 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTACA ACAGGTACCC TCTCCCCCGT GAGGGGGACA TTCTAATTGC GACCGTGAAG CAGGTTTTTG ATTACGGTAG TTACGTCACG CTAGACGAGT ATGGTGGGCT TCAGGCCTTC CTTCCCTGGA GTGAGATAAG TACCAGGTGG GTTAAGAACA TAAGGGACGT GGTAAAGGAG GGAAGGAAGA TCATCGTCAA GGTGATTAGA GTTGACCGCA AGAAGGGGTC AGTTGACGTT TCCCTGAAGA AGGTCAATGA CGACGATAGG AGGAAGAAGA ACGCCCAGTG GAAGAGGATA CAGAAGATCG ACAAGATCCT GGAGATAGTG GCGCAGAAGC TCAAGAAGAG CGAGAAGGAA GCATGGGAGC AGGTGGCCTG GAAGCTCGAG GAGAAGTACG GCGACGTGTA CGAGGCCCTC CAGAAGGCAT CTAAGGAAGG GGAGAAGGTC CTCCTGGATG CGGGGGTGCC AGAGATCTGG ATTAAGCCCA TCCTTGAGGA GGCCAGCAAA CACGGGGAAG AGAAGAAGGT TAAGGAGAGC AAAGTGGTCC TGGTGAAGAG CCTGGACCCT GATGGTGTGG ACAAGATCAG GAAGGTGTTC GACCTCGAGG ATGAGGGGGA CATAAGGATA TTCACGATTG GTGCCCCAAG GTATAGGGTT GAGGTTTCAG GGACCGACCC GAAGGCTGTA GCACAGAGGC TCGAGGAGGT CGTACAGAGG ATACTAGAGA GGGCAAAGGA GGAGGGCGTT TCAGCGGAGG TTGCCAAGTG A
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Protein sequence | MIYNRYPLPR EGDILIATVK QVFDYGSYVT LDEYGGLQAF LPWSEISTRW VKNIRDVVKE GRKIIVKVIR VDRKKGSVDV SLKKVNDDDR RKKNAQWKRI QKIDKILEIV AQKLKKSEKE AWEQVAWKLE EKYGDVYEAL QKASKEGEKV LLDAGVPEIW IKPILEEASK HGEEKKVKES KVVLVKSLDP DGVDKIRKVF DLEDEGDIRI FTIGAPRYRV EVSGTDPKAV AQRLEEVVQR ILERAKEEGV SAEVAK
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