Gene Msed_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1605 
Symbol 
ID5103969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1553023 
End bp1553424 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content46% 
IMG OID640507495 
Productperoxiredoxins-like protein 
Protein accessionYP_001191684 
Protein GI146304368 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.438042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.500457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC TGACAATTCT TCTCGCGGAC AACAGTATGG ACAAGTTATA TCATGGGCTT 
GTGCTGGCAC TTGACGCTAG ATCCATAGAC TGGACTGTGA AGTTCTTTGT GACATCGCAG
GCTGTCTCGA TCTTTACAAA GAAGTTCAAG GGTAAGTCTA AACTGAGGCT TGGTTTTCTG
GCTAGGCTTT TCGTGGAATC GGAAATGAAG AGAATGAAGC TTCCAGATAC TTCTGTGCTC
ATAGAGGAGG CCATAAAGGA GGGTGTGGAG TTTTACGTGG ATGAAGTAGG GCTAAAGATA
GCTCATTTAG GGAAGGAGGA TCTGCTGGAT AACGTGAAAC TCTCTGGAGG AATTACGTAT
CTGAAGGAGG CTCAAGACTC TGACGTGGTG GTCACATTAT GA
 
Protein sequence
MPKLTILLAD NSMDKLYHGL VLALDARSID WTVKFFVTSQ AVSIFTKKFK GKSKLRLGFL 
ARLFVESEMK RMKLPDTSVL IEEAIKEGVE FYVDEVGLKI AHLGKEDLLD NVKLSGGITY
LKEAQDSDVV VTL