Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1012 |
Symbol | |
ID | 5105611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 932156 |
End bp | 933088 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506911 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001191104 |
Protein GI | 146303788 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00402297 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGTTA AGGGAAGGCT CCTCACTAGC ATGGGGTTTG CACTAATCCT CACCGTGGTG TCAGAGGCCC TCATCCTTCT GGTTATATCC TCAGCCCTCA GGATCTCGCT CGTCTTAGTT TTCCCTCTAC TCTTCGTGTT CTGGTTATTT CAATGGCTAA TCTCACCTTA CCTTGTGGGA AGGGGAGGAA TAGAGATTCA TTCAAGCGAC CCAGAGTATG GCTGGTTAGT ACAGATGGTG AGGGAGGTGG CGCTCGCGTC GAGGATATCC CCACCTAGGG TTTTCCTCGT GGATGCTCCC TATCCCAACG CCTTCGCCTA TGGAAATAGC GTAAGCGGGA AAAGGGTGGG AATAACCATA CCTCTCCTTC AGATCTTAGA CGTGAATGAA CTCAGGGCTG TAATAGCCCA TGAGGTGGGT CACCTGAAAC ATAGGGACGT GGAAATTGGG ATGACCCTAG GCTTGATACC TACTGCCCTG GGTTACATTA GCACCCTCCT CATGAACTTC GGGTTTTTCG CAATACTCTT AGCAGGAGAC GAATTTGAGC TTCTATTTGC CCTACTTGCC TTGGCCCTTG GTTTTATCCT TCTAGTTGCC ACGTTAACTC TTCAGGTCTT TGTCCTATGG TTCAATAGGC TGAGGGAATC CTATGCCGAC TACAACTCGT ATGAGGTCCT AGGTGAGGGA TCGAGCGCCC TTGCCACTGC TCTGGCAAAG ATAGAGCTAT ACATGCAGAA AATTAGACTG GACCCCTTCA CTGGGATCAT TGTGACGGCA GCCCCGGTCA GGGTCGAGAG CCAGGAACCT CTCCTCGTTG TGAGGGAGTG GCTCAACAAG AAGGTGAGCG TCTTCACGGA CATACTTTCC ACACATCCAC ATCCGGCCAG GAGAGTCCAG ATGCTGTATA GGCTAATCAG GGAAGGCGGT TAA
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Protein sequence | MSVKGRLLTS MGFALILTVV SEALILLVIS SALRISLVLV FPLLFVFWLF QWLISPYLVG RGGIEIHSSD PEYGWLVQMV REVALASRIS PPRVFLVDAP YPNAFAYGNS VSGKRVGITI PLLQILDVNE LRAVIAHEVG HLKHRDVEIG MTLGLIPTAL GYISTLLMNF GFFAILLAGD EFELLFALLA LALGFILLVA TLTLQVFVLW FNRLRESYAD YNSYEVLGEG SSALATALAK IELYMQKIRL DPFTGIIVTA APVRVESQEP LLVVREWLNK KVSVFTDILS THPHPARRVQ MLYRLIREGG
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